Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25]
131 sequences; 30,363,635 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq73 89.7 1e-12
seq38 89.7 1e-12
>seq73
Length=165115
Score = 89.7 bits (98), Expect = 1e-12
Identities = 287/443 (65%), Gaps = 2/443 (0%)
Strand=Plus/Plus
Query 243296 AGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CC 243354
|||| |||||||| | | || ||||| || | || ||||| ||| ||| ||
Sbjct 158102 AGCGCCTCGTCGCATTCGCCGCAGTCGAAGGCATCTTCTTCTCCGGCTCCTTC-GCGTCC 158160
Query 243355 ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATC 243414
||||| ||||| ||| ||| ||||||| |||||| | || |||||| |||||
Sbjct 158161 ATCTTCTGGCTCAAGAAACGCGGTCTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATC 158220
Query 243415 AGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAAC 243474
|||||||||||| | ||| | |||| || || || | ||| || ||
Sbjct 158221 TCCCGCGACGAGGGCATGCACACCGACTTCGCCTGCCTACTGCTCTCCCACCTCAAGCAC 158280
Query 243475 AAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAA 243534
| || ||| | || | |||||| || || || | | ||| ||||
Sbjct 158281 CGCCCCTCAAAAGAAGCCATCCAGGCCATCATCGTCGAGGCCGTCGCCATCGAGCAGGAG 158340
Query 243535 TTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAG 243594
||| | ||||| | || ||| || | ||||||||| | | || ||| |||
Sbjct 158341 TTCCTCACAGACGCCCTCCCCTGCGCCCTCTTGGGCATGAACGCCAACCTGATGAAGCAG 158400
Query 243595 TACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAAC 243654
|||||||| ||||| ||||| ||| | || |||| | || | || | |||
Sbjct 158401 TACATCGAGTTCGTCGCCGATCGCCTGCTCGTCGCTATGGGCAACCCCAAGTACTTCAAG 158460
Query 243655 TCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTC 243714
|| |||||||||||| ||| |||||| ||| || || || || || |||||||||
Sbjct 158461 TCTCAGAACCCCTTTGACTTCATGGAGAACATCTCTCTCGCTGGCAAGACAAACTTCTTC 158520
Query 243715 GAAAAGCGTGTCAGTGATTATCA 243737
|| ||||||||| |||| || ||
Sbjct 158521 GAGAAGCGTGTCGGTGACTACCA 158543
>seq38
Length=837193
Score = 89.7 bits (98), Expect = 1e-12
Identities = 183/268 (68%), Gaps = 7/268 (3%)
Strand=Plus/Minus
Query 333726 TTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGG 333785
|| ||||| |||| || || || | || |||| || || || ||||||| |||
Sbjct 762175 TTGACGAAGTCGGCGAGGTTGCCGGTATAGGTCTTGAGTTTC---TTTTGTTCGTAGTGG 762119
Query 333786 ATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAA 333845
|| || ||||| || ||||||||||| ||||||||||| || || || | | | |
Sbjct 762118 ATGATGTTTGTGCAGACGGCGTCGAGGAAGCCGGAGTCGTGGGAGACGATGAGGGAGGTG 762059
Query 333846 ACGTCCTTAAGGTTGATCAGGTA-TTCAATC-AGCCACCTCACGTTAGACACAGAAAGAT 333903
| || | || || | ||||| ||| || ||||| | ||||| | || ||||
Sbjct 762058 ATTTCGCTGTGGGTGTTGAGGTAGTTC--TCGAGCCATTTGACGTTGGCGACGTCGAGAT 762001
Query 333904 GGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAG 333963
| || || |||||||| || || | | | ||| || |||||| || || || ||||
Sbjct 762000 GATTAGTTGGCTCGTCGAGCAGGAAGACGTCGGCGCGCATGAGCATGGCGCGGGCGAGAG 761941
Query 333964 CGAGTTTCATTTTCCACCCTCCTGAAAG 333991
|||| ||||| ||||| || || || ||
Sbjct 761940 CGAGCTTCATCTTCCAGCCACCGGATAG 761913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102878148884850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |