Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq73 89.7 1e-12 seq38 89.7 1e-12 >seq73 Length=165115 Score = 89.7 bits (98), Expect = 1e-12 Identities = 287/443 (65%), Gaps = 2/443 (0%) Strand=Plus/Plus Query 243296 AGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CC 243354 |||| |||||||| | | || ||||| || | || ||||| ||| ||| || Sbjct 158102 AGCGCCTCGTCGCATTCGCCGCAGTCGAAGGCATCTTCTTCTCCGGCTCCTTC-GCGTCC 158160 Query 243355 ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATC 243414 ||||| ||||| ||| ||| ||||||| |||||| | || |||||| ||||| Sbjct 158161 ATCTTCTGGCTCAAGAAACGCGGTCTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATC 158220 Query 243415 AGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAAC 243474 |||||||||||| | ||| | |||| || || || | ||| || || Sbjct 158221 TCCCGCGACGAGGGCATGCACACCGACTTCGCCTGCCTACTGCTCTCCCACCTCAAGCAC 158280 Query 243475 AAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAA 243534 | || ||| | || | |||||| || || || | | ||| |||| Sbjct 158281 CGCCCCTCAAAAGAAGCCATCCAGGCCATCATCGTCGAGGCCGTCGCCATCGAGCAGGAG 158340 Query 243535 TTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAG 243594 ||| | ||||| | || ||| || | ||||||||| | | || ||| ||| Sbjct 158341 TTCCTCACAGACGCCCTCCCCTGCGCCCTCTTGGGCATGAACGCCAACCTGATGAAGCAG 158400 Query 243595 TACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAAC 243654 |||||||| ||||| ||||| ||| | || |||| | || | || | ||| Sbjct 158401 TACATCGAGTTCGTCGCCGATCGCCTGCTCGTCGCTATGGGCAACCCCAAGTACTTCAAG 158460 Query 243655 TCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTC 243714 || |||||||||||| ||| |||||| ||| || || || || || ||||||||| Sbjct 158461 TCTCAGAACCCCTTTGACTTCATGGAGAACATCTCTCTCGCTGGCAAGACAAACTTCTTC 158520 Query 243715 GAAAAGCGTGTCAGTGATTATCA 243737 || ||||||||| |||| || || Sbjct 158521 GAGAAGCGTGTCGGTGACTACCA 158543 >seq38 Length=837193 Score = 89.7 bits (98), Expect = 1e-12 Identities = 183/268 (68%), Gaps = 7/268 (3%) Strand=Plus/Minus Query 333726 TTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGG 333785 || ||||| |||| || || || | || |||| || || || ||||||| ||| Sbjct 762175 TTGACGAAGTCGGCGAGGTTGCCGGTATAGGTCTTGAGTTTC---TTTTGTTCGTAGTGG 762119 Query 333786 ATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAA 333845 || || ||||| || ||||||||||| ||||||||||| || || || | | | | Sbjct 762118 ATGATGTTTGTGCAGACGGCGTCGAGGAAGCCGGAGTCGTGGGAGACGATGAGGGAGGTG 762059 Query 333846 ACGTCCTTAAGGTTGATCAGGTA-TTCAATC-AGCCACCTCACGTTAGACACAGAAAGAT 333903 | || | || || | ||||| ||| || ||||| | ||||| | || |||| Sbjct 762058 ATTTCGCTGTGGGTGTTGAGGTAGTTC--TCGAGCCATTTGACGTTGGCGACGTCGAGAT 762001 Query 333904 GGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAG 333963 | || || |||||||| || || | | | ||| || |||||| || || || |||| Sbjct 762000 GATTAGTTGGCTCGTCGAGCAGGAAGACGTCGGCGCGCATGAGCATGGCGCGGGCGAGAG 761941 Query 333964 CGAGTTTCATTTTCCACCCTCCTGAAAG 333991 |||| ||||| ||||| || || || || Sbjct 761940 CGAGCTTCATCTTCCAGCCACCGGATAG 761913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878148884850