Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 241 2e-58 seq73 131 2e-25 seq23 107 2e-18 >seq2 Length=1003996 Score = 241 bits (266), Expect = 2e-58 Identities = 1106/1737 (64%), Gaps = 27/1737 (2%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| || |||||||| ||| ||||||| || | ||||| || Sbjct 557856 CGGAGGTAGTACATGCCAGTCTTGAGACCCATCTTCCAGCCAGCGAAGTGCATGCTGGTA 557797 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | || || | || | || ||| | || || |||||||||||| Sbjct 557796 ATCTTGCCCATCGTCGGCTCCTTCAAGTGGATGTTGAGTGACTGAGACTGATCGATGAAG 557737 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTTCT 113775 ||||| || || ||||| | | ||| | | | | ||| |||||||| || | Sbjct 557736 GCACCACGGTCAGCAGCCATCTGCAGAACAGTACGTTGTGA-GATCTCCCACACTGTCTT 557678 Query 113776 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTT 113835 ||| || ||| || ||| | |||| | | ||| ||||| ||||| ||| | Sbjct 557677 GTAAAGTGCCTTGATGTCAGCCGGGACGTTTGGCACATTCTGGATAGAGCCGCCCTCAGC 557618 Query 113836 GACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG 113895 | ||| | | |||||| | | |||||| | || | | || |||| | || Sbjct 557617 AATGATGCGGTTCTTCATGTTGTCTGACCACAAGCCGAGATCGACCAGGTCCTTGAGCAG 557558 Query 113896 ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCG 113954 || ||||| ||||| || || || || | ||| ||||| |||| | Sbjct 557557 CCAGGGGTTAACAACCTGGAACTCGCCAGCAAGAACTCGGCG-AGAGTAGATGTTGGATG 557499 Query 113955 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGG 114014 |||| ||||| ||||||||||||||||||||||| |||| || |||||||| ||||||| Sbjct 557498 TGTAAGGCTCGAAGCACTCATTGTTACCCAAGATCTGGGATGTTGAGGCTGTAGGCATGG 557439 Query 114015 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCC 114074 | |||| || || ||| || | ||| | || || |||| || | |||| Sbjct 557438 GAGCCAGCAGCAGTGAGTTGCGAACACCGTGTTGAGCGATATCAGCCTTCAGCGAATCCC 557379 Query 114075 AGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGG 114134 |||| | | | | | | | |||||| || |||||||||| ||||| ||| Sbjct 557378 AGTCCCACAGGTCCGTAGGAGTGACATTCCACATGTCGTACTGGAGGATGCCTTGTGAGA 557319 Query 114135 CTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTC---CGCCAATTCGGAGCTCG 114191 | || || |||| | |||||||||| ||||| || ||| ||||| | || | | Sbjct 557318 CAGGTGAGCCCTGATATGTCTCGTACGGGCC---AAGCTCTTTCGCCAGTGCGCACGAAG 557262 Query 114192 CCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCG 114250 | ||| || || || || || |||||||| || | || | ||||||| | || Sbjct 557261 CTGTGAGAGCAGCATGGTAGATAGTCTCAAAGATCTGTATGTTGAGCTGCCTTG-CTTCA 557203 Query 114251 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 114310 || ||||| | || || || || |||| ||||||||||||||||| || Sbjct 557202 GGAGAGTCAAATGGTAGACGAAGTGCAAGGAAGGCATCGGCGAGACCTTGGACACCAAGA 557143 Query 114311 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTA 114370 || || || || ||||| | || ||| || || || || || | || | Sbjct 557142 CCGATGGGTCGGTGTCTGAAGTTGCTCTTCTTGGCTTCTTCAACAGGGTAGTAGTTGATG 557083 Query 114371 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 114430 ||||| | | | || | || ||| ||||| | | || || || || || | Sbjct 557082 TCGATGATCTTGTTCAAGTTGCGGGTCACAACTTGAGCGACCTCGTGCAGACGACCGAAG 557023 Query 114431 TCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 114487 || | || || | || ||| || || || || || | | || |||| || Sbjct 557022 TCGTATTCACCACGGGACTGGTCAACGA-ATGCT--GGCAGCGACAAAGAAGCCAAGTTG 556966 Query 114488 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 114547 || |||| | ||||||| | |||||||||| || || || || ||||| || || ||| Sbjct 556965 CAGACAGCGACCTCATCCGGAGCAGTGTACTCGATGATCTCAGTGCACAAGTTGGAGCTC 556906 Query 114548 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATG 114607 |||||||| | ||| || || || ||||| ||| || ||||||||||| |||||| Sbjct 556905 CGGATGGTGCCAAGGTTTTTCTGGTTGGACTTGCGGTTGCAAGCATCCTTGTAGAGCATG 556846 Query 114608 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGC 114667 ||||| || || || || || || | || |||||| || | ||||| | ||| Sbjct 556845 TATGGGGTGCCGGTTTCGGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTTTGTGCTTTG 556786 Query 114668 ACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCA 114727 | || | | | || || || | |||||| | ||||| || || || |||||||| Sbjct 556785 ATGGTCGACCTACCACGACCTTCTTGCTCGTATCTGGTGTACAGAGCCTCGAACTCTTCG 556726 Query 114728 CCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCC 114787 || | || | || ||||| || | |||||| | || | ||| | | Sbjct 556725 CCGTACACATCAGCTAGACCTGGGCACTCGTTTGGGCACATCAGTGTCCAATCTTGGTTC 556666 Query 114788 TCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTG-AGAAGAGATCCCGACA 114846 | ||| ||||||| |||||| | || || |||| | ||| | |||| || || ||| Sbjct 556665 TTCTCCACACGCTGCATGAACAAATCAGGCGTCCACA-AGCCGTAGAACAGGTCTCGAGC 556607 Query 114847 GCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTG 114906 ||| | ||||| | || || || || | | | ||| || | |||||| ||||| Sbjct 556606 GCGGACCTCTTCCTTGCCGTGGTTCTTGCGTAGGTTGAGAAACTCGAAGATATCAGCGTG 556547 Query 114907 CCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATA 114963 ||| || || |||||||| || | || ||| ||| ||| | || | ||||| Sbjct 556546 CCATGGCTCGAGGTACACGGCAAATGCACCCGGACGCTTGTTGCCACCTTGATCAACATA 556487 Query 114964 CCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT 115023 | || ||| || || || | ||||| ||||||| |||| || || ||||| Sbjct 556486 GCGAGCAGTGTTGTTGAAGACTCTCAGCATGGGAATGAGGCCATTGGAGGTACCGTTTGT 556427 Query 115024 CCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCT 115081 ||| || || ||| | | |||| | || || || | ||||| ||| || Sbjct 556426 GCCCGCAATGTAGGAGCC--AGTGGCACGGATGCAGTGAGCGTTGAGACCAACACCACCA 556369 Query 115082 GCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCA 115141 || | ||||||||| || || | ||||| | ||||||| || || || ||| Sbjct 556368 GCACTCTTTGAGATCATGGCACATGTCTTGAGAGTATCGTAGATGCCATCAATGCTGTCC 556309 Query 115142 CCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAG 115201 ||| | |||| |||||||| ||||| |||||| || || ||||| ||| Sbjct 556308 GACTTCATGTCGATGAGGAAGCAAGACGACAGTTGTGGGTGGGGCGTGCCAGCTGCGAAC 556249 Query 115202 AGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACG 115261 || ||||||| ||||| |||| | ||||||| | ||||||||| | | | Sbjct 556248 AGTGTTGGTGAGGCGTGTGTGAAGGTCTTCTGGGACAAGAGGTTGTAGGTCTCGATGGCC 556189 Query 115262 GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 115318 || ||| || ||||| || || | | ||| ||||| ||||||| || ||| Sbjct 556188 TTCTCAACGTCGTCACCGTGGATGCCAACAGCGACACGCATCAACATGTGCTGAGGT 556132 >seq73 Length=165115 Score = 131 bits (144), Expect = 2e-25 Identities = 561/871 (64%), Gaps = 17/871 (2%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| || || ||||||||||||||||||||||| || | | ||| |||||||| Sbjct 158541 GTAGTCACCGACACGCTTCTCGAAGAAGTTTGTCTTGCCAGCGAGAGAGATGTTCTCCAT 158482 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAGAC 125876 || ||||| ||||||| || || || | |||| || || ||| || | Sbjct 158481 GAAGTCAAAGGGGTTCTGAGACTTG-AAGTACTTGGGGTTGCCCATAGCGACGAGCAGGC 158423 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 |||| | |||| |||| ||||||| |||| | | |||||| || | |||| | Sbjct 158422 GATCGGCGACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAAGAGGGCGC 158363 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 | ||||| ||||| || |||| ||| ||| || | ||||| || | |||||| | Sbjct 158362 AGGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGGCGACGGCCTCGACGATGATGGCCT 158303 Query 125997 GAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAG-AGTTCCACGGCAAACTCT 126055 | |||| || || | | || | || || ||| ||| || || Sbjct 158302 GGATGGCTTCTTTTGAGGGGCGGT-GCTTGAGGTGGGAGAGCAGTAGGCAGGCGAAGTCG 158244 Query 126056 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGA 126115 ||| | |||||||| ||||||||||| || || |||||| || || ||||| ||| Sbjct 158243 GTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGA 158184 Query 126116 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175 || || ||||| | |||||| || | || || || ||||||||||| || || || Sbjct 158183 CCGCGTTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCGGAGAAGAAGATGCCTTCGACT 158124 Query 126176 CACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCAAACCACTTC 126232 ||||| || | ||| |||| || |||| ||| | |||| | | ||| Sbjct 158123 GCGGCGAATGCGACGAGGCGCTGCGCGAAGG---TCGATTGCTTGTCGGAGATCCAACGG 158067 Query 126233 ATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA-GTTC 126291 | ||||| | ||||| || |||||| |||| ||| | ||| || || |||| || Sbjct 158066 AGTGCCCAGTCGGCCTTCTTGCGGATACAGGGGATGGTGTCGATGGCGTCGAAGAGGTGT 158007 Query 126292 CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTG 126351 || || || || || |||||||| | || ||||| || || ||||| ||| Sbjct 158006 GATCGTTGCT-TGGGGTCGCTGATGTACGTGTCGATGAGCAGCGAGTACATTTCGGAGTG 157948 Query 126352 GACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCT 126410 || ||| ||| || | ||| | ||||||| | ||||||||| | ||| |||| Sbjct 157947 GATGTTTTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGCGCTTCGGGGACCTGGACCT 157889 Query 126411 CATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 126470 | ||| || | || ||||| || || || |||||| | || || || | Sbjct 157888 CGCCGGAGAAGCGCTCGAGGAGGTTCTCGTTGACGATGCCGTCGGACGCGGCGAAGAAGG 157829 Query 126471 CCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAG--GGT-CTTCCAGTCGTCAA 126527 | || | | ||||| | | | || | ||||| || ||| | ||||| | | Sbjct 157828 CGAGCACGTGTGAAATGAAGTACCGCTCGTCGTCGTTGAGGCGGTGGTGCCAGTGTTGTA 157769 Query 126528 GATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTCTTATAGA 126587 |||| | ||||| || || || || || ||||| ||| || || ||||| || | Sbjct 157768 GATCTTGGGAGAGGTCGACTTCTTCTGCGGTCCAGAAGCTAGCTTCTGCTTTCTTGTACA 157709 Query 126588 GTTCCCAAAGGTGGGGATACTTCAGGGGGAA 126618 || ||| | | | ||||| |||||||| Sbjct 157708 TTTGCCAGATCTCATGGTACTTGAGGGGGAA 157678 >seq23 Length=959784 Score = 107 bits (118), Expect = 2e-18 Identities = 239/356 (67%), Gaps = 12/356 (3%) Strand=Plus/Minus Query 172601 TGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATA 172660 |||| | ||| | || ||| || || || || |||||| | |||| ||||||||| Sbjct 339968 TGGAGAAAATTGATGAGGAGTCCTTTGATATGACTACCATCATGATCCTGATCCGTCATG 339909 Query 172661 ATCATAAGCCGACCATAGCGAAGCTCGGAAAC---ATCTTGATACTCCTTACCCTGTTGA 172717 |||||||| | ||||| || || ||| ||| | ||| |||| |||||| Sbjct 339908 ATCATAAGGTGGCCATACCGCAG---GGACCGCGTATCCTCATAGACCTTCTTGTGTTGA 339852 Query 172718 AGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAA 172777 |||||||||| ||||| | |||||| ||| || | || || | || | | Sbjct 339851 AGACCCAAGAATGACTTGATAGCATTGATCTCAGCATTCTTCGAGATCTGATCAACGGTA 339792 Query 172778 GCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCA 172837 || ||||| || || | ||| || || || |||||||||||| |||| || || Sbjct 339791 GCGTCGCGTACGTTAAGAATCTTTCCTCGAAGCGGGAACACACCGAAGTGGTCCGGAGAG 339732 Query 172838 ACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGC 172897 || |||| | ||||||| | || || ||| || || |||||||| || | |||||| Sbjct 339731 ACAACAGCACGACCAGCCATGGCAAGACCCTTGGCAGAGTCACCCTCAGTGAGGATGAGA 339672 Query 172898 GTACA---CTTTCCAGATTGTGCCGTCCCCGCCTTGTTCGCATCGTCCAACTTGGG 172950 || || | ||||| || || || || ||||| |||||| ||||||| || Sbjct 339671 GTGCAGAGATGGCCAGA---AGCAGTGCCAGCTTTGTTGGCATCGACCAACTTTGG 339619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352621833480