Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 176 4e-39 >seq2 Length=1003996 Score = 176 bits (194), Expect = 4e-39 Identities = 1064/1682 (63%), Gaps = 60/1682 (4%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| || || ||| || ||||| |||||||| | Sbjct 556058 AACTACCAATACTTCGGCTTCAAGACACTTGAGCGATCATACCTGCTCAAGATCGGCAAG 556117 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| ||||| |||| || || || ||||||| ||||| | || || ||||| || Sbjct 556118 AAGGTGGCCGAGAGACCTCAGCACATGTTGATGCGTGTCGCTGTTGGCATCCACGGTGAC 556177 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||| | ||| | | | | | || | || | |||| | || ||| Sbjct 556178 GACGTTGAGAAGGCCATCGAGACCTACAACCTCTTGTCCCAGAAGACCTTCACACACGCC 556237 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 | || || |||||| || || || || ||||| |||| || || ||||| || Sbjct 556238 TCACCAACACTGTTCGCAGCTGGCACGCCCCACCCACAACTGTCGTCTTGCTTCCTCATC 556297 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | ||| | ||| ||| || || | ||| | |||||| ||||| | || Sbjct 556298 GAC-ATGAAGTCGGACAGCATTGATGGCATCTACGATACTCTCAAGACATGTGCCATGAT 556356 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 |||||| || || || | || ||| | ||| | | ||||||| || ||||| Sbjct 556357 CTCAAAGAGTGCTGGTGGTGTTGGTCTCAACGCTCACTGCATCCGTGCCACTGGCTCCTA 556416 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| || || || || |||||||| |||||| | || ||||| | ||||||||||| Sbjct 556417 CATTGCGGGCACAAACGGTACCTCCAATGGCCTCATTCCCATGCTGAGAGTCTTCAACAA 556476 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || ||||| || || || ||||| | | | |||| | || || || || || Sbjct 556477 CACTGCTCGCTATGTTGATCAAGGTGGCAACAAGCGTCCGGGTGCATTTGCCGTGTACCT 556536 Query 94194 CGAGCCCTGGCACGCGGA---CGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 |||||| |||||||| || | | || |||| || |||| || |||||||||||||| Sbjct 556537 CGAGCCATGGCACGCTGATATCTTCGAG--TTTC-TCAACCTACGCAAGAACCACGGCAA 556593 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || | || ||||||| ||||||| | ||| ||| || | || ||| | Sbjct 556594 GGAAGAGGTCCGCGCTCGAGACCTGTTCTACGGCTTGTGGACGCCTGATTTGTTCATGCA 556653 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || || ||||| ||| | |||| || | || || || || || || || || | Sbjct 556654 GCGTGTGGAGAAGAACCAAGATTGGACACTGATGTGCCCAAACGAGTGCCCAGGTCTAGC 556713 Query 94371 CGACGTTTGTGGATCGC-GTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAAG 94428 || || | || || | || || || |||| | | ||||| ||| | ||| Sbjct 556714 TGATGTGTACGG--CGAAGAGTTCGAGGCTCTGTACACCAGATACGA---GCAAG--AAG 556766 Query 94429 GCCA-GGAAGGTT----ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGG 94483 | | || |||| || | || ||||| ||| | || | || | ||| Sbjct 556767 GTCGTGGTAGGTCGACCATCAAAGCACAAAAGCTCTGGTACGCCATTCTCGAGGCTCAGA 556826 Query 94484 TGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGC 94543 || || || || || ||||| | | |||||| || |||| ||||||||||||| Sbjct 556827 CCGAAACCGGCACCCCATACATGCTCTACAAGGATGCTTGCAACCGCAAGTCCAACCAGA 556886 Query 94544 AGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTC 94603 | |||| || ||| |||||| || ||||||| ||||| ||||||| ||| ||| Sbjct 556887 AAAACCTTGGCACCATCCGGAGCTCCAACTTGTGCACTGAGATCATCGAGTACACTGCTC 556946 Query 94604 CGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAAC-CTGTCCACTTTCGTG--CGAG 94660 |||| ||| | ||||| || ||| | |||| | | | ||| | | ||||| | || Sbjct 556947 CGGATGAGGTCGCTGTCTGCAACTT-GGCTTCTTTGTCGCTGCCAGCATTCGTTGACCAG 557005 Query 94661 ATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTG-TGAACTTCGCGGGAAGG 94719 | || | ||| ||||| ||| |||| | ||| | | | || || Sbjct 557006 -TCCCGTGGTGAATACGACTTCGGTCG-TCTGCACGAGGTCGCTCAAGTTG--------- 557054 Query 94720 ATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAG 94779 || | ||| |||||| | | ||||||| |||| |||||| || || || || Sbjct 557055 -TGACCCGCAACTTGAACAAGATCATCGACATCAACTACTACCCTGTTGAAGAAGCCAAG 557113 Query 94780 AACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTG 94839 || ||| | | || || |||||||| | || ||||| ||| |||| || || | Sbjct 557114 AAGAGCAACTTCAGACACCGACCCATCGGTCTTGGTGTCCAAGGTCTCGCCGATGCCTTC 557173 Query 94840 GTGATGATGCGTCTGCCCTACGACTCTGTCGACGC--GGCGGGTTTGAATTTGAACATAT 94897 | | ||||| || | |||||| || || ||| | | || | | || | Sbjct 557174 CTTGCACTTCGTCTACCATTTGACTCTCCTGAAGCAAGGCAGCTC--AACATACAGATCT 557231 Query 94898 TCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTC-CACTTGGCCAGATCGGACGGC 94956 | || | || || | | || | | | || | |||| ||| | | | ||| Sbjct 557232 TTGAGACTATCTACCATGCTGCTCTCACAGCTTCGTGCGCACT-GGCGAAAGAGCTTGGC 557290 Query 94957 GGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTC 95016 || |||| | | | || || || | ||| ||||| | |||| |||| | Sbjct 557291 ---CCGTACGAGACATATCAGGGCTCACCTGTCTCACAAGGCATCCTCCAGTACGACATG 557347 Query 95017 TGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAA 95076 ||| ||| | || ||| |||| |||||||| | || |||||| | || Sbjct 557348 TGGAATGTCACTCCTACGGACCTGTGGGACTGGGATTCGCTGAAGGCTGATATCGCTCAA 557407 Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 |||||||| ||| | ||||| |||| |||||||| || ||||| || | |||||| Sbjct 557408 CACGGTGTTCGCAACTCACTGCTGCTGGCTCCCATGCCTACAGCCTCAACATCCCAGATC 557467 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 | || ||||| |||| ||||| || | ||| |||||| | ||| | || || || Sbjct 557468 TTGGGTAACAATGAGTGCTTCGAGCCTTACACATCCAACATCTACTCTCGCCGAGTTCTT 557527 Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTG 95254 || || || |||| || | ||| || || ||||||| ||| ||| || Sbjct 557528 GCTGGCGAGTTCCAGGTTGTTAACCCCTGGCTGCTCAAGGACCTG--GTCGATCTCGGCT 557585 Query 95255 TGTGGGGTGACAAGGTCAAGAACCA----ACTGCTACGCGCCAACGGCTCCGTCCAGAAC 95310 ||||| ||||| | ||||||| | |||| | || ||||| ||||||| Sbjct 557586 TGTGGTCAGACAACATGAAGAACCGCATCATTGCTGAGGGC----GGCTCTATCCAGAAT 557641 Query 95311 ATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370 | || | | |||| ||||||||||| || |||||||| |||||||||||| | || Sbjct 557642 GTGCCAAACGTCCCGGCTGACATCAAGGCACTTTACAAGACAGTGTGGGAGATCTCACAA 557701 Query 95371 CG 95372 || Sbjct 557702 CG 557703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722389890760