Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq46 86.0 4e-12 >seq46 Length=1539107 Score = 86.0 bits (94), Expect = 4e-12 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || |||| || || ||||| |||| |||||| || || || || || ||||| | Sbjct 988544 CCACCACGCAGGCGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAATCTG-- 988601 Query 39553 AAAACG--CGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 | | || ||| | || |||||||| || ||| | || || || ||||| || || | | Sbjct 988602 AGAGCGTTCGTCCGTCTTCCAATTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTG 988661 Query 39611 GTACGCCTTCTTTGTCGCATATTTTT-TGTTTA-ATCGTCGCTACTGTGTCTGCGCTTTC 39668 | | || || ||||| || || | || | || |||| | ||||||| ||| Sbjct 988662 GGATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATG--GTGTCTGACGATTC 988719 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||| ||||| || || ||||| || || | ||| || |||||||||||||| Sbjct 988720 CACTTCCAACGTGATAGTTTTGCCTGTGAGAGTCTTGACGAAGATCTGCAT 988770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347369045402723