Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq73 316 2e-81 seq46 114 1e-20 seq48 87.8 2e-12 >seq73 Length=165115 Score = 316 bits (350), Expect = 2e-81 Identities = 608/884 (69%), Gaps = 27/884 (3%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | || ||| | ||| || || |||||||| Sbjct 158525 TTCTCGAAGAAGTTTGTCTTGCCAGCGAGAGAGATGTTCTCCATGAAGTCAAAGGGGTT- 158467 Query 132685 GCTGTG--TTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGA 132739 ||| | ||| ||| ||||| |||| || || |||||||||| | ||||| |||| Sbjct 158466 -CTGAGACTTGAAGTACTTGGGGTTGCCCAT-AG--CGACGAGCAGGCGATCGGCGACGA 158411 Query 132740 ACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCT 132798 |||||||||| ||| ||| | || || | | | || || | |||| || || || Sbjct 158410 ACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAAGAGGGCGCAGGGG-AGGGCG 158352 Query 132799 TCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCC 132858 || ||||| || |||||||||||||| || ||| || ||| || | | || Sbjct 158351 TCTGTGAGGAACTCCTGCTCGATGGCGACGGCCTCGACGATGATGGCCTGGATG---GCT 158295 Query 132859 GCGCTCG---GCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAG 132915 | | | | || ||| | || || || | ||| || |||||| |||| | Sbjct 158294 TCTTTTGAGGGGCGGTGCTTGAGGTGGGAGAGCAGTAGGCAGGCGAAGTCGGTGTGCATG 158235 Query 132916 CCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTT 132975 |||||||| | ||| ||||| |||||| ||| || | ||||||||| || |||||||| Sbjct 158234 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGACCGCGTTTC 158175 Query 132976 TTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAA 133035 |||||||| || |||| ||||| ||| || ||||||| ||| ||||| || ||||| Sbjct 158174 TTGAGCCAGAAGATGGACGCGAAGGAGCCGGAGAAGAAGATGCCTTCGACTGCGGCGAAT 158115 Query 133036 GCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCG 133095 || || ||||||| |||| || | || ||| || |||||| || || ||||| ||| Sbjct 158114 GCGACGAGGCGCTGCGCGAAGGTCGATTGCTTGTCGGAGATCCAACGGAGTGCCCAGTCG 158055 Query 133096 GCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTT-TCTCTTC 133154 ||||| | || || || || || |||||||||| || | || || || | | Sbjct 158054 GCCTTCTTGCGGATACAGGGGATGGTGTCGATGGCGTCGAAGA---GGTGTGATCGTTGC 157998 Query 133155 CGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCC 133212 || ||| | ||| ||||||||||| ||| |||||||| ||||| | ||| ||| Sbjct 157997 TTGGGGTCGCTGATGTACGTGTCGATGAGCAGCGAGTACATTTCGGAGTGGATGTTTTCC 157938 Query 133213 ATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA 133272 || ||| || |||||||| ||||| ||||| ||| ||||| || || | ||| Sbjct 157937 ATCATGATCTGGAAGCCGTAGAAGCAACGCGCTTCGGGGACCTGGACCTCGCCGGAGAAG 157878 Query 133273 CGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGC 133332 ||||||| || || |||||||||||||||||| |||||||| ||||| |||||||| Sbjct 157877 CGCTCGAGGAGGTTCTCGTTGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGCACGTGT 157818 Query 133333 TTGATGAAATGGCGCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGGAC 133389 ||||| | ||||||| |||||| | || | | ||||| | || | ||| Sbjct 157817 GAAATGAAGTACCGCTCGTCGTCGTTGAGGCGGTGGTGCCAGTGTTGTAGATCTTGGGAG 157758 Query 133390 AGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATG 133449 ||||| || || || ||||||| || || || ||||| |||||||| ||| || Sbjct 157757 AGGTCGACTTCTTCTGCGGTCCAGAAGCTAGCTTCTGCTTTCTTGTACATTTGCCAGATC 157698 Query 133450 TCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTC 133493 || || | | ||| || | || || ||| ||||||||| Sbjct 157697 TCATGGTACTTGAGGGGGAAGAGGACGAAGCGGTTGGGGTTTTC 157654 >seq46 Length=1539107 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| |||||||| |||| |||||| | | Sbjct 988998 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCT 988939 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || || | ||||| ||||| || || |||||| Sbjct 988938 GACACCATCGACAATG--TCAAGAGTAAGATTCAGGACAAGGAGGGCATCCCACCCGACC 988881 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || || || | ||| ||||| ||||| || || | || || || ||||||| Sbjct 988880 AGCAACGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGTCGTACTCTGTCTGACTACA 988821 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| || || | || || || |||||||||||| | | ||||| Sbjct 988820 ACATCCAGAAAGAGTCTACTCTACACTTGGTGCTGCGTCTTCGTGGCGG 988772 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || ||||| ||||||||| | || |||||| || | |||| | | | |||| | |||| Sbjct 989202 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATTGACAACG--TCAAGA 989145 Query 38327 AAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || || | ||||| || || ||||| | ||||| || || ||||| | || |||| Sbjct 989144 GCAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAACGTCTCATCTTTGCTGGCA 989085 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | ||||| || || | |||||| | | ||||||||||||||| |||||| | || || | Sbjct 989084 AGCAGCTCGAAGATGGTCGCACCTTGAGCGACTACAACATCCAGAAGGAATCCACCCTTC 989025 Query 38446 ATTTGGTGCTGCGTTTGAGAGGCGG 38470 | | || || ||| | | ||||| Sbjct 989024 ACCTTGTCCTCCGTCTCCGTGGCGG 989000 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| |||||||| ||||| | || || || | | Sbjct 988770 ATGCAGATCTTCGTCAAGACTCTCACAGGCAAAACTATCACGTTGGAAGTGGAATCGTCA 988711 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || |||| ||||| ||||| || || | |||| Sbjct 988710 GACACCATCGACAATG--TGAAGAGCAAGATCCAGGACAAGGAGGGTATCCCACCTGACC 988653 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| | || | ||| ||||| || |||| |||| || || ||| || |||| Sbjct 988652 AACAGCGATTGATCTTCGCCGGCAAGCAATTGGAAGACGGACGAACGCTCTCAGATTACA 988593 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 |||| || ||||| ||| || ||||| |||||||| || Sbjct 988592 ACATTCAGAAGGAGAGC-ACTCTGCACTTGGTGCTCCG 988556 >seq48 Length=500340 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/200 (72%), Gaps = 7/200 (4%) Strand=Plus/Minus Query 38243 AATGCAAATA--TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||| || | ||||| || || ||||||||||| ||||||||| |||| || ||| | Sbjct 102462 AATGCGAACAGCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCT 102403 Query 38301 ACCGACAGC-GTGCAAACGCTTAAAGA-AAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 | |||| | || || | | |||| || |||| ||||| || || || || | | Sbjct 102402 TCAGACACCATTGACAATG--TCAAGAGCAAGATCCAAGACAAGGAAGGCATCCCACCTG 102345 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| || || || || | ||| ||||| || ||||| || | ||||| || |||| Sbjct 102344 ACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTGGAAGATGGCCGCACTCTATCAGACT 102285 Query 38419 ACAACATCCAAAAGG-AAGC 38437 | |||||||| |||| |||| Sbjct 102284 ATAACATCCAGAAGGTAAGC 102265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171980967040