Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-14 >seq2 Length=1003996 Score = 96.9 bits (106), Expect = 3e-14 Identities = 408/639 (64%), Gaps = 4/639 (1%) Strand=Plus/Minus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || |||||||| || ||||||||||| ||||| | ||| | || | || | | ||| Sbjct 678247 ACCAGACGATTGTCGAAATCTTCACCACCCAAGTGAGTGTCACCAGCAGTGGACTTGACT 678188 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | || | || || |||| | ||| || | ||||| || || ||||| | ||| Sbjct 678187 TCAAAGATACCCTCCTCAATGGTCAAGAGGGAGACATCGAAAGTACCGCCACCGAGATCG 678128 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || || || || || || || || || ||||| || || | ||||| Sbjct 678127 AAGATGAGAACGTTGCGCTCACCCTCGGACTTCTTGTCGAGACCGTAGGCGATGGCAGCC 678068 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 |||||||| || || ||||||| | ||| || |||||||| || || || || || Sbjct 678067 GCAGTTGGCTCGTTGATAATTCGAAGAACGTTGAGACCAGCGATGAGGCCGGCGTCCTTG 678008 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 || || || | ||| || || || || || ||||| || || | ||| || | | || Sbjct 678007 GTAGCCTGACGTTGAGAGTCATTGAAGTAGGCAGGGACTGTTACAACAGCGTTGTTGACC 677948 Query 518315 TCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 518374 ||| | || | || || | | ||| || | || ||||| | ||| || Sbjct 677947 GTGCCACCGAGGTATGATTCAGCAGTCTCTCGCATCTTGGTCAAGATCATGGCTGAGATC 677888 Query 518375 TGTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATT 518433 | |||||||| | |||| || |||| || |||| || ||| || | Sbjct 677887 TCTTCTGGGGTGAAGGTCTTGTCCTCGCCCTTGA-ATTCGACTTGAACGACTGGCTTGTC 677829 Query 518434 ACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTG-GTCAT 518492 | || | || || || || ||| |||||||| | || || || | || | Sbjct 677828 GGCCTTGTTGACGACCTTGAAGGGGAAGTGCTTCATATCAGCCTGTAC-CTCAGCATCGT 677770 Query 518493 TAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAG 518552 | || | | ||||| || || || ||||| || | ||| ||| || || || || Sbjct 677769 TGAACTTGCGGCCAATCAACCGCTTCGCATCGAAGACAGTGTTGTGGGGGTTCATGGCGA 677710 Query 518553 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 518612 | |||| || || ||||| || || ||| | || || || || || | || | || | Sbjct 677709 CCTGATTCTTCGCGGCATCGCCGATGAGACGCTCGGTGTCGGTGAAAGCGACGAACGAGG 677650 Query 518613 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAA 518651 |||||||||| |||||||| ||||| || ||||| |||| Sbjct 677649 GAGTTGTGCGGTTACCTTGGTCATTGGCGATAATCTCAA 677611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780815899348486