Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq68 129 7e-25 >seq68 Length=1388079 Score = 129 bits (142), Expect = 7e-25 Identities = 268/389 (69%), Gaps = 15/389 (4%) Strand=Plus/Minus Query 154725 ATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTT 154784 ||||||| ||||| || || ||||||||||| |||| ||||| || ||||| || Sbjct 1095312 ATACCAGTATCAGCGCACGGGACTAATCCTGCCTCGGCTGCGATGGCTGGCATGAAGGTC 1095253 Query 154785 GT-AGGTGTCAAGTGTGATG--ATGATGGT-AACATAGACATCAAAGATCTAGAGAAGAA 154840 || | || | ||||| || | || || || | || || |||||| || |||| Sbjct 1095252 GTCACGT-TGAAGTGCGACACCAAGACGGGCAATCTTGATATTGCAGATCTGCAGGAGAA 1095194 Query 154841 A-GC---AATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCATCTACAC 154896 || || ||| | || || ||| | || ||||| || ||||| |||| Sbjct 1095193 GTGCGAGAAACATAAGGAC----GATCTGGCCGCAATCATGATCACGTACCCGAGTACAT 1095138 Query 154897 ATGGTGTATTTGAAACTAACATTA-GACAGATATGTAAGATCGTTCATGACAATGGTGGT 154955 |||| || ||||| | | || | || || | || |||| |||||||| | ||||| Sbjct 1095137 ATGGCGTCTTTGAGCCGGAGATCAAGAAAG-TGTGCCAGATTGTTCATGATCACGGTGGA 1095079 Query 154956 CAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAG 155015 ||||| || | ||||| || ||||| ||||| ||| | ||||| | ||| | || Sbjct 1095078 CAGGTGTACATGGATGGCGCCAATCTGAATGCGCAGATTGGACTCTGCAGTCCAGGCGAC 1095019 Query 155016 TATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGT 155075 |||||| || || || || || ||||| || || |||||||| ||||||||||| || Sbjct 1095018 ATTGGTGCTGACGTCTGCCACCTGAACTTGCACAAGACATTCTGCATTCCACATGGCGGC 1094959 Query 155076 GGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||||| ||||| |||||||| || || || Sbjct 1094958 GGAGGCCCTGGTGTAGGTCCCATCGGAGT 1094930 Score = 102 bits (112), Expect = 9e-17 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 153783 CCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGA 153842 ||| | || || ||||| || ||||| || ||||||||| | |||||||| ||| | Sbjct 1096308 CCTCTAGGCTACGGAGGCCCGCATGCAGCCTTCTTTGCATGTAACGACAAGTACAAGCGG 1096249 Query 153843 AAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCA-TACAG 153901 || || ||||| | |||| ||| ||| |||| | || || ||||| ||| | Sbjct 1096248 AAAATTCCTGGACGGCTTGTGGGTGTTTCAAAAGATCGCTTGGGCAACAAAGCTCTAC-G 1096190 Query 153902 ATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTG 153961 | ||| | ||||| ||||||||||| ||| | |||| || || ||||| || ||||| Sbjct 1096189 CCTGGCATTGCAGACCAGAGAGCAGCACATCCGCCGAGAGAAGGCTACCAGCAATATCTG 1096130 Query 153962 CACAGCTCAGGCACTGCTGGCTAATATG 153989 || || || ||| |||| ||||||||| Sbjct 1096129 TACCGCCCAAGCATTGCTCGCTAATATG 1096102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579211851539040