Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq68 152 6e-32 >seq68 Length=1388079 Score = 152 bits (168), Expect = 6e-32 Identities = 273/389 (70%), Gaps = 15/389 (4%) Strand=Plus/Minus Query 159400 ATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTT 159459 ||||||| ||||| || || ||||||||||| || || | |||||| || ||||| || Sbjct 1095312 ATACCAGTATCAGCGCACGGGACTAATCCTGCCTCGGCTGCGATGGCTGGCATGAAGGTC 1095253 Query 159460 GT-AGGTGTCAAGTGTGATG--ATGATGG-CAACATAGACATCAAAGATCTAGAGAAGAA 159515 || | || | ||||| || | || || ||| | || || |||||| || |||| Sbjct 1095252 GTCACGT-TGAAGTGCGACACCAAGACGGGCAATCTTGATATTGCAGATCTGCAGGAGAA 1095194 Query 159516 A-GC---AATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACAC 159571 || || ||| | || || ||| | || ||||| || || || |||| Sbjct 1095193 GTGCGAGAAACATAAGGAC----GATCTGGCCGCAATCATGATCACGTACCCGAGTACAT 1095138 Query 159572 ATGGTGTATTTGAAACAAACATCA-GACAGATATGTAAGATTGTTCATGAGAATGGTGGT 159630 |||| || ||||| | | |||| || || | || ||||||||||||| | ||||| Sbjct 1095137 ATGGCGTCTTTGAGCCGGAGATCAAGAAAG-TGTGCCAGATTGTTCATGATCACGGTGGA 1095079 Query 159631 CAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGAC 159690 ||||| || | ||||| || ||||| ||||| ||| | || || | ||| | ||| Sbjct 1095078 CAGGTGTACATGGATGGCGCCAATCTGAATGCGCAGATTGGACTCTGCAGTCCAGGCGAC 1095019 Query 159691 TATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGT 159750 |||||| || || || || || ||||| || ||||||||||| ||||||||||| || Sbjct 1095018 ATTGGTGCTGACGTCTGCCACCTGAACTTGCACAAGACATTCTGCATTCCACATGGCGGC 1094959 Query 159751 GGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||| ||||| |||||||| || || || Sbjct 1094958 GGAGGCCCTGGTGTAGGTCCCATCGGAGT 1094930 Score = 116 bits (128), Expect = 4e-21 Identities = 152/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 158458 CCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGA 158517 ||| | || |||||||| || ||||| || ||||||||| | |||||||| ||| | Sbjct 1096308 CCTCTAGGCTACGGAGGCCCGCATGCAGCCTTCTTTGCATGTAACGACAAGTACAAGCGG 1096249 Query 158518 AAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAAGCA-TACAG 158576 || || ||||| | |||| ||| ||| |||| || || || ||||| ||| | Sbjct 1096248 AAAATTCCTGGACGGCTTGTGGGTGTTTCAAAAGATCGCTTGGGCAACAAAGCTCTAC-G 1096190 Query 158577 ATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTG 158636 | ||| | ||||| ||||||||||| ||| | |||| || || ||||| || ||||| Sbjct 1096189 CCTGGCATTGCAGACCAGAGAGCAGCACATCCGCCGAGAGAAGGCTACCAGCAATATCTG 1096130 Query 158637 CACAGCACAAGCACTGCTGGCTAATATG 158664 || || |||||| |||| ||||||||| Sbjct 1096129 TACCGCCCAAGCATTGCTCGCTAATATG 1096102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050237066160