Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq46 158 3e-33 seq48 120 7e-22 seq57 89.7 1e-12 >seq46 Length=1539107 Score = 158 bits (174), Expect = 3e-33 Identities = 148/186 (80%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCG-GCAAGAGTTCTCCCATCTTC 194990 ||||||||||| ||||| || || || || ||||| ||| |||| || | |||||||| Sbjct 989018 ACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGCTCAAG-GTGCGACCATCTTC 989076 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || || ||||| || ||||| ||||| |||||||||||||| ||||| || Sbjct 989077 GAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTG 989136 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||||||||| |||||||||||||| || || |||||||| | ||||| Sbjct 989137 AATCTTGCTCTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTT 989196 Query 195111 TCCTGT 195116 || || Sbjct 989197 GCCGGT 989202 >seq48 Length=500340 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || || || || | ||||| | |||||||| || ||||| || |||||||| Sbjct 102272 TTCTGGATGTTATAGTCTGATAGAGTGCGGCCATCTTCCAGTTGCTTGCCGGCGAAGATC 102331 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || ||||| ||||| || || |||||||| |||||||| || || |||||| || ||| Sbjct 102332 AGGCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGCTCTTGACATTGTCA 102391 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 |||||||| ||| ||||| || ||||| | ||||| || || | || || ||||| Sbjct 102392 ATGGTGTCTGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 102450 >seq57 Length=1510414 Score = 89.7 bits (98), Expect = 1e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| ||||| || || || || || |||| || || | || ||||||||||| Sbjct 1446741 GTGAAGAGTCGACTCCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCGTCTTCGAGCTG 1446682 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||| || |||||||| || || || ||||| || || ||||| || |||||| Sbjct 1446681 CTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCT 1446630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479737804477