Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq46 105 4e-18 seq48 86.0 4e-12 >seq46 Length=1539107 Score = 105 bits (116), Expect = 4e-18 Identities = 153/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || |||||||| ||||| ||||| || || | || |||| || Sbjct 988790 ACCAAGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGAGTACGACCATCCTCA 988849 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || ||||||||||| | || | ||||||||||| | Sbjct 988850 AGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGA 988909 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| || | ||||| ||| | ||| || |||| || ||||| Sbjct 988910 ATCTTACTCTTGAC--AT--TGTCGATGGTGTCAGATGACTCGACCTCGAGAGTGATGGT 988965 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || ||||||||||| || ||||| |||||| Sbjct 988966 CTTGCCAGTGAGAGTCTTGACGAAGATTTGCATA 988999 >seq48 Length=500340 Score = 86.0 bits (94), Expect = 4e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 34787 GCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGC 34846 |||| | ||||| ||||||||||| || || | || |||| ||||| || || ||||| Sbjct 102265 GCTTACCTTCTGGATGTTATAGTCTGATAGAGTGCGGCCATCTTCCAGTTGCTTGCCGGC 102324 Query 34847 AAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGAC 34906 || || || ||||||||||| | || | || |||||||| ||||| ||||| Sbjct 102325 GAAGATCAGGCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGCTCTTGAC 102384 Query 34907 GGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | || | || | ||| || |||| ||| ||||| || |||||||| ||||| Sbjct 102385 ATTGTCAATGGTGTCTGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTT 102444 Query 34967 CACAAAG 34973 || ||| Sbjct 102445 GACGAAG 102451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633081702168