Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq51 111 1e-19 >seq51 Length=425537 Score = 111 bits (122), Expect = 1e-19 Identities = 161/224 (72%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 30117 CTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG--TCCGTGTACTCTGCTCCGAAA 30174 |||||| || ||| |||| |||||| | | | | | | || ||| ||||| |||||| Sbjct 275777 CTGATCGACGCCCTTCCCGCTGTAGTC-GTCTTGAGGCGTGCG-GTATTCTGCGCCGAAA 275834 Query 30175 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30234 |||| ||| ||||| ||||| || || || ||||| || ||||| | | ||||||| Sbjct 275835 TGCCGCCATTGGAAGCCGTAGACGGGGCCGAGGTCGCCTTCTTCGCGATCGGTGAAGCCC 275894 Query 30235 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 30294 |||||| | ||| | | ||| |||||| ||||||||||||| | || |||||| Sbjct 275895 AGCTTGTCGAGGAAGGCGCGGGAGCCGTTGCCGTCCCAGATCTTGATGCCGGCTTCGGAG 275954 Query 30295 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30338 || ||||||| ||||| || ||||||||| || || || Sbjct 275955 AGGGGTTTGGAGGAGGTGGATCCGGCGACGAACCAGAGGAGTTC 275998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616947616463