Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq46 91.5 1e-12 seq48 89.7 3e-12 >seq46 Length=1539107 Score = 91.5 bits (100), Expect = 1e-12 Identities = 105/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| ||||| || ||| || | || || || ||| || Sbjct 989005 ACGGAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTC-GCTCAAGG 989063 Query 480611 TCTGTT-ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669 | | |||||| || ||||| |||||||| || |||||||| || ||||||||||| | Sbjct 989064 TGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGAGGAATGC 989123 Query 480670 CTTCCTTGTCTTGAATCTT 480688 |||||||||| |||||||| Sbjct 989124 CTTCCTTGTCCTGAATCTT 989142 >seq48 Length=500340 Score = 89.7 bits (98), Expect = 3e-12 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 ||||| || | |||||| | | |||||| |||||||| || || || || || ||||| Sbjct 102281 TTATAGTCTGATAGAGTGCGGCCATCTTCCAGTTGCTTGCCGGCGAAGATCAGGCGTTGC 102340 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || ||||| || || |||||||||||||| ||||| |||||| ||||| || || Sbjct 102341 TGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGCTCTTGACATTGTCAATGGTGTCT 102400 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAA 480763 | | | | || ||||| || || || || ||||| ||||| ||||| Sbjct 102401 GAAGACTCCA-CCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 102450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268173580774388