Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq46 113 4e-20 >seq46 Length=1539107 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || |||||||| ||| | ||||| ||| | | Sbjct 988770 ATGCAGATCTTCGTCAAGACTCTCACAGGCAAAACTATCACGTTGGAAGTGGAATCGTCA 988711 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || ||| Sbjct 988710 GACACCATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAA 988651 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| ||||| || || |||| || ||| | |||||||| ||| Sbjct 988650 CAGCGATTGATCTTCGCCGGCAAGCAATTGGAAGACGGACGAACGCTCTCAGATTACAAC 988591 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| || || ||||||||| | || |||| || || Sbjct 988590 ATTCAGAAGGAGAGCACTCTGCACTTGGTGCTCCGCCTGCGTGGTGG 988544 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || || || ||||| || || | | Sbjct 988998 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCT 988939 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || ||||| || Sbjct 988938 GACACCATCGACAATGTCAAGAGTAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAG 988879 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| ||||||| ||||| || ||||| |||||| | | |||| || || ||| Sbjct 988878 CAACGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGTCGTACTCTGTCTGACTACAAC 988819 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || || || || || |||||||||||| |||| Sbjct 988818 ATCCAGAAAGAGTCTACTCTACACTTGGTGCTGCG 988784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896863292680