Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq73 165 1e-34 seq123 113 7e-19 seq2 104 4e-16 seq69 93.3 7e-13 seq72 86.0 1e-10 >seq73 Length=165115 Score = 165 bits (182), Expect = 1e-34 Identities = 237/329 (72%), Gaps = 9/329 (3%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||| | |||||| ||| |||||||||||| || ||||| ||| Sbjct 158234 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGACCGCGTTTC 158175 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| ||| ||| ||||| |||||||| ||||| ||||| || Sbjct 158174 TTGAGCCAGAAGATGGACGCGAAGGAGCCGGAGAAGAAGATGCCTTCGACTGCGGCGAAT 158115 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 ||||||| |||| || || || | || | | |||||| | ||||| Sbjct 158114 GCGACGAGGCGCTGCGCGAAGGT---CGATTGCTTGTCGGAGATCCAACGGAGTGCCCAG 158058 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG-CGAA-AGAGGTGGTCCTT-C 794577 || ||||| || | | |||| | |||||||||||| |||| || ||| || || | Sbjct 158057 TCGGCCTTCTTGCGGATACAGGGGATGGTGTCGATGGCGTCGAAGAGGTGTGATCGTTGC 157998 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 | | ||||| ||| ||| ||||||||||| |||||||| | || |||||||||||| Sbjct 157997 TTG---GGGTCGCTGATGTACGTGTCGATGAGCAGCGAGTACATTTCGGAGTGGATGTTT 157941 Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || |||||||||||| || ||||| Sbjct 157940 TCCATCATGATCTGGAAGCCGTAGAAGCA 157912 Score = 116 bits (128), Expect = 6e-20 Identities = 185/261 (71%), Gaps = 7/261 (3%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| ||||| |||||||| ||| Sbjct 158557 TGACACCTGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTTGTCTTGCCAGCGA 158498 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTC---TCGCACC 794007 | ||||| |||||| | || ||||| | | | ||| ||| | || || Sbjct 158497 GAGAGATGTTCTCCATGAAGTCAAAGGGGTTCTGAGACTTGAAGTACTTGGGGTTGC-CC 158439 Query 794008 CGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGT 794067 ||||||| |||||||| ||||||||||| || |||||||| ||| ||| ||||| Sbjct 158438 ATAGCGACG--AGCAGGCGATCGGCGACGAACTCGATGTACTGCTTCATCAGGTTGGCGT 158381 Query 794068 TCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGG 794127 ||||||| | ||| || ||| || | || ||| ||||| | |||||| |||||| Sbjct 158380 TCATGCCCAAGAGGGCGCAGGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGGCGACGG 158321 Query 794128 CCTCGATGATGATCTGCCTGG 794148 |||||| |||||| |||||| Sbjct 158320 CCTCGACGATGAT-GGCCTGG 158301 >seq123 Length=1047575 Score = 113 bits (124), Expect = 7e-19 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||||||||||||||| | || | ||| | || |||||||| || || ||| Sbjct 347254 GCTGCCAACTACCTCGACATCAAGGCTCTGTTGGATGTTGGCTGCAAGACTGTCGCGAAC 347313 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753 | |||||||||||||| |||||||| ||||||||||| || ||||| Sbjct 347314 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACTTTCAACAT 347360 >seq2 Length=1003996 Score = 104 bits (114), Expect = 4e-16 Identities = 168/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 || || |||||||| || |||| ||| ||||| | |||||||| | ||||| ||||| Sbjct 556497 TGATCAACATAGCGAGCAGTGTTGTTGAAGACTCTCAGCATGGGAATGAGGCCATTGGAG 556438 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 ||||| |||||||| | ||||| ||| | ||| || | ||| ||| | || Sbjct 556437 GTACCGTTTGTGCCCGCAATGTAGGAGCCAGTGGCACGGATGCAGTGAGCGTTGAGACCA 556378 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 | || || || ||| ||||| | || || | || || || ||||||||||| || Sbjct 556377 ACACCACCAGCACTCTTTGAGATCATGGCACATGTCTTGAGAGTATCGTAGATGCCATCA 556318 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||| | ||||||||| | || ||||| ||||| ||| ||| | | |||||| Sbjct 556317 ATGCTGTCCGACTTCATGTCGATGAGGAAGCAAGACGACAGTTGTGGGTGGGGCGTGCCA 556258 Query 2073781 GC 2073782 || Sbjct 556257 GC 556256 Score = 96.9 bits (106), Expect = 5e-14 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 2071847 TCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCC 2071906 || |||| || |||| |||| || |||||||| |||||| || || || || || | Sbjct 556664 TCTCCACACGCTGCATGAACAAATCAGGCGTCCACAAGCCGTAGAACAGGTCTCGAGCGC 556605 Query 2071907 GGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCC 2071966 || ||| ||||||||||||||||| |||| ||| | |||| || || ||||||| Sbjct 556604 GGACCTCTTCCTTGCCGTGGTTCTTGCGTAGGTTGAGAAACTCGAAGATATCAGCGTGCC 556545 Query 2071967 ACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 | ||||| ||||| |||||| || ||| |||||| ||| || Sbjct 556544 ATGGCTCGAGGTACACGGCAAATGCACCCGGACGCTTGTTGCCACC 556499 >seq69 Length=209079 Score = 93.3 bits (102), Expect = 7e-13 Identities = 103/137 (75%), Gaps = 8/137 (6%) Strand=Plus/Minus Query 654001 CTACTACCAGGCCCTGCGCCACGTGGCCATCGACAAGATCCACGCCCGGCCGCGCGGCCC 654060 ||||||||| |||||||||| ||| | ||||||||||||| |||| | ||||| || Sbjct 34067 CTACTACCAACGCCTGCGCCACATGGTCGACGACAAGATCCACTCCCGCGCCCGCGGGCC 34008 Query 654061 CGTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCGGTCGCGCTCG----GGCGGCTTTC 654116 | ||||| |||||| ||||| |||||||| ||| ||||| ||||| | | Sbjct 34007 CACTCAGATCCTCACCCGCCAGCCCGTCGAGGG----TCGTGCTCGTGACGGCGGTCTGC 33952 Query 654117 GCCTCGGAGAGATGGAG 654133 | |||||||||||||| Sbjct 33951 GGTTCGGAGAGATGGAG 33935 >seq72 Length=173639 Score = 86.0 bits (94), Expect = 1e-10 Identities = 115/156 (74%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| || ||||| ||||| ||||| |||||| ||||||| || ||| | | Sbjct 26023 GTACTTGGTGACAGC-TTGGTGCCCTCAGAGACAGCGTGCTTGGCCAGCTCACCGGGGAG 25965 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || | |||| |||||||||||| || | | ||| ||| |||||| || | Sbjct 25964 GATGAGTCTGACGGAGGTCTGGATCTCTCGCGAGGAGATGGTGGACTTCTTGTT-GTATG 25906 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGA 1485625 | || || | |||||| ||| ||| ||| |||| Sbjct 25905 CAGCAAGCTTGGAGGCCTCAGTGGCGACGCGCTCGA 25870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916232464932509