Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 5e-11 >seq2 Length=1003996 Score = 86.0 bits (94), Expect = 5e-11 Identities = 193/290 (67%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || |||||||| || ||||||||||| ||||| | ||| | || | || | | ||| Sbjct 678247 ACCAGACGATTGTCGAAATCTTCACCACCCAAGTGAGTGTCACCAGCAGTGGACTTGACT 678188 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | || | || || |||| | ||| || | ||||| || || ||||| | ||| Sbjct 678187 TCAAAGATACCCTCCTCAATGGTCAAGAGGGAGACATCGAAAGTACCGCCACCGAGATCG 678128 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 || || || || || || || || || || ||||| || || | ||||| Sbjct 678127 AAGATGAGAACGTTGCGCTCACCCTCGGACTTCTTGTCGAGACCGTAGGCGATGGCAGCC 678068 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 |||||||| || || ||||||| | ||| || |||||||| || || || || || Sbjct 678067 GCAGTTGGCTCGTTGATAATTCGAAGAACGTTGAGACCAGCGATGAGGCCGGCGTCCTTG 678008 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 || || || | ||| || || || || || ||||| || || | ||| || Sbjct 678007 GTAGCCTGACGTTGAGAGTCATTGAAGTAGGCAGGGACTGTTACAACAGC 677958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740623968453606