Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq46 120 6e-22 >seq46 Length=1539107 Score = 120 bits (132), Expect = 6e-22 Identities = 169/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 82577 TCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATA 82636 |||| ||| || | || || || || ||||||||||| || ||||| || || || Sbjct 988537 TCACTGACCACCACGCAGGCGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTA 988596 Query 82637 ATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATC 82696 ||| || || ||| |||||||| | ||| || || || ||||| | || ||||| || Sbjct 988597 ATCTGAGAGCGTTCGTCCGTCTTCCAATTGCTTGCCGGCGAAGATCAATCGCTGTTGGTC 988656 Query 82697 TGGAGGTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAG 82755 || || || || ||||| || || ||| ||||| || ||||| || || || || | Sbjct 988657 AGGTGGGATACCCTCCTTGTCCTGGATC-TTGCTCTTCACATTGTCGATGGTGTCTGACG 988715 Query 82756 GTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| |||||||| || || || |||||||| | ||||| || || |||||||| Sbjct 988716 ATTCCACTTCCAACGTGATAGTTTTGCCTGTGAGAGTCTTGACGAAGATCTGCAT 988770 Score = 86.0 bits (94), Expect = 1e-11 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| || || ||||| ||||| || || || || Sbjct 988998 TACCGCCACGGAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGC 989057 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | ||| ||||| || || || ||||||||||| || | ||| || || |||| Sbjct 989058 TCAAGGTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGAG 989117 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || |||||||| || |||||| ||||| || || || ||||| || || | || Sbjct 989118 GAATGCCTTCCTTGTCCTGAATC-TTGCTCTTGACGTTGTCAATGGTGTCCGAGGACTCG 989176 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || | || || |||||||| || Sbjct 989177 ACCTCAAGGGTGATGGTCTTGCCGGT 989202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825552064409