Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2 250 2e-61 seq73 147 2e-30 seq46 120 3e-22 seq48 102 8e-17 seq57 87.8 2e-12 >seq2 Length=1003996 Score = 250 bits (276), Expect = 2e-61 Identities = 1007/1571 (64%), Gaps = 39/1571 (2%) Strand=Plus/Minus Query 148229 GAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCAC 148288 ||| |||| |||||| | || ||| | | || || ||||| |||||||| || || || Sbjct 557581 GAGATCGACCAGGTCCTTGAGCAGCCAGGGGTTAACAACCTGGAACTCGCCAGCAAGAAC 557522 Query 148289 GCGCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCT 148347 || || ||| || | |||| || | || || || |||| ||||| ||||| |||| Sbjct 557521 TCGGCG-AGAGTAGATGTTGGATGTGTAAGGCTCGAAGCACTCATTGTTACCCAAGATCT 557463 Query 148348 GCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTT 148407 | | || | || || |||||| || | |||||| |||||||| | |||| | | Sbjct 557462 GGGATGTTGAGGCTGTAGGCATGGGAGCCAGCAGCAGTGAGTTGCGAACACCGTGTTGAG 557403 Query 148408 TTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGT 148467 || | |||||| | |||||||||| || || || || || |||||||||| Sbjct 557402 CGATATCAGCCTTCAGCGAATCCCAGTCCCACAGGTCCGTAGGAGTGACATTCCACATGT 557343 Query 148468 CGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527 ||||||| || ||||| | | || ||||| || | |||||| || || Sbjct 557342 CGTACTGGAGGATGCCTTGTGAGACAGGTGAGCCCTGATATGTCTCGTACGGGCCAAGCT 557283 Query 148528 CCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCC 148587 | ||||||| |||| || ||| || | | ||| || ||||| || || Sbjct 557282 CTTTCGCCAGTGCGCACGAAGCTGTGAGAGCAGCATGGTAGATAGTCTCAAAGATCTGTA 557223 Query 148588 TGTTGAGCAGC---GCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGT 148644 |||||||| || || | | | || | || | ||| || | || || | Sbjct 557222 TGTTGAGCTGCCTTGCTTCAGGAGAG---TCAAATGGTAGACGAAGTGCAAGGAAGGCAT 557166 Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704 |||| || || || || || | || ||||| |||||| | | |||| || Sbjct 557165 CGGCGAGACCTTGGACACCAAGACCGATGGGTCGGTGTCTGAAGTTGCTCTTCTTGGCTT 557106 Query 148705 TCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTT 148763 || | || |||| |||| ||||||||||||| ||||| ||||| ||| || | Sbjct 557105 CTTCAACAGGGTAGTAGTTGATGTCGATGATCTTGTTCAAG-TTGCGGGTCACAACTTGA 557047 Query 148764 GTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCA---------TCTACG-ATGCATCG 148813 | | | |||| | || ||||| | || || ||| |||| | | Sbjct 557046 GCGACCTCGTGCAGACGACCGAAGTCGTATTCACCACGGGACTGGTCAACGAATGC-TGG 556988 Query 148814 GTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTAC 148873 || | | ||| || | ||||| || || ||||||||| || ||||||| | Sbjct 556987 ---CAGCGACAAAGAAGCCAAGTTGCAGACAGCGACCTCATCCGGAGCAGTGTACTCGAT 556931 Query 148874 GATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCT 148933 |||||| | ||||| ||| || ||| ||| | ||| || || ||| ||||| Sbjct 556930 GATCTCAGTGCACAAGTTGGAGCTCCGGATGGTGCCAAGGTTTTTCTGGTTGGACTTGCG 556871 Query 148934 GTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT 148993 |||||| || |||||||| |||||||| || ||| ||||| ||| | || | || Sbjct 556870 GTTGCAAGCATCCTTGTAGAGCATGTATGGGGTGCCGGTTTCGGTCTGAGCCTCGAGAAT 556811 Query 148994 GAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCG---TA--GCGACCCTCCTGCTCG 149048 | || ||| | | | || ||| || ||| || ||||| || |||||| Sbjct 556810 G--GCGTACCAGAGCTTTTGTGC---TTTGATGGTCGACCTACCACGACCTTCTTGCTCG 556756 Query 149049 TATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTG 149108 ||| || ||||| ||||||| | |||||||| ||| | ||||| ||||||| | Sbjct 556755 TATCTGGTGTACAGAGCCTCGAACTCTTCGCCGTACACATCAGCTAGACCTGGGCACTCG 556696 Query 149109 TGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGC 149168 | |||||||| || | ||| | || | | ||| |||| ||| |||| ||| ||| Sbjct 556695 TTTGGGCACATCAGTGTCCAATCTTGGTTCTTCTCCACACGCTGCATGAACAAATCAGGC 556636 Query 149169 ACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGC 149228 ||| | |||| | ||||| || || | ||||| ||| ||| ||| Sbjct 556635 GTCCACAAGCCGTAGAACAGGTCTCGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGT 556576 Query 149229 AGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCC 149288 |||||||| | ||| || || |||||||| ||||| | |||||| || | || ||| Sbjct 556575 AGGTTGAGAAACTCGAAGATATCAGCGTGCCATGGCTCGAGGTACACGGCAAATGCACCC 556516 Query 149289 TTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATA 149345 ||| ||||| || || || || | ||| | ||||||| || |||| | ||| Sbjct 556515 GGACGCTTGTTGCCACCTTGATCAACATAGCGAGCAGTGTTGTTGAAGACTCTCAGCATG 556456 Query 149346 GGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACT 149405 || | |||| ||| || ||||| || |||| ||| || || | Sbjct 556455 GGAATGAGGCCATTGGAGGTACCGTTTGTGCCCGCAATGTAGGAGCCAGTGGCACGGATG 556396 Query 149406 TTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAG 149464 ||| |||||| || | || || | ||||||||| || || ||| ||| Sbjct 556395 CAGTGAGCGTTGAGACCAACACCACCAGCACTCTTTGAGATCATGGCACATGTC-TTGAG 556337 Query 149465 CGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACAT 149524 || ||||||||| || |||||||| ||||||| | || ||||| || ||| Sbjct 556336 AGTATCGTAGATGCCATCAATGCTGTCCGACTTCATGTCGATGAGGAAGCAAGACGACAG 556277 Query 149525 TTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTG 149584 ||| || ||||||| || ||||||| || || ||||||||| || ||||| Sbjct 556276 TTGTGGGTGGGGCGTGCCAGCTGCGAACAGTGTTGGTGAGGCGTGTGTGAAGGTCTTCTG 556217 Query 149585 GCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGC 149644 | || | | ||| | ||||| | || | ||| || || |||||||| | || Sbjct 556216 GGACAAGAGGTTGTAGGTCTCGATGGCCTTCTCAACGTCGTCACCGTGGATGCCAACAGC 556157 Query 149645 GACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTA 149704 ||| ||||||| ||| ||||| |||| ||| ||||| || || || || ||||||| ||| Sbjct 556156 GACACGCATCAACATGTGCTGAGGTCTCTCGGCCACCTTCTTGCCGATCTTGAGCAGGTA 556097 Query 149705 GCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAAT 149764 || ||||||||| |||| ||||| | ||||| ||||| ||| | | | | || Sbjct 556096 TGATCGCTCAAGTGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCATAGACGAT 556037 Query 149765 GGCGGCGTCGA 149775 ||| | || || Sbjct 556036 GGCCGAGTTGA 556026 >seq73 Length=165115 Score = 147 bits (162), Expect = 2e-30 Identities = 505/773 (65%), Gaps = 31/773 (4%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || |||||||| ||||| | | || ||||| | Sbjct 158544 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTTGTCTTGCCAGCGAGAGAGATGTTCTC 158485 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || || || ||||| | || ||||| || || | ||||| |||||||| Sbjct 158484 CATGAAGTCAAAGGGGTTCTGAGACTTGAAGTACTTGGGGTTGCCCATAGCGACGAGCAG 158425 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 || || || || ||||| ||||||| ||| | ||||||||||||| | || Sbjct 158424 GCGATCGGCGACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAAGAGGGC 158365 Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589 | || | | || | |||| ||||||| ||| ||| | || ||||| || |||| Sbjct 158364 G-CAGGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGGCGACGGCCTCGACGATGATGG 158306 Query 120590 CGAGCATAG----TGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCAC 120645 | | || | | | | |||| ||| | || | | | | |||| |||| Sbjct 158305 CCTGGATGGCTTCTTTTGAGGGGCG----GTGCTTGAGGTGGGAGAGC-AGTA--GGCAG 158253 Query 120646 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCG 120705 || ||||| ||||||| |||||||||||| || || ||||||||| || || |||||| Sbjct 158252 GCGAAGTCGGTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 158193 Query 120706 GGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACG 120765 ||||| | || |||||| |||| |||| || ||| ||| || ||||| | | Sbjct 158192 GGCATCAGACCGCGTTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCGGAGAAGAAGATG 158133 Query 120766 CCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATC 120825 || || || ||| || ||||| | ||||| || || |||| |||| | |||| Sbjct 158132 CCTTCGACTGCGGCGAATGCGACGAGGCGCTGCGCGAAGGTCGATTGCTTGTCGGAGATC 158073 Query 120826 CACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGC 120885 || | ||||| |||||||| ||||| | || || || |||| |||| | Sbjct 158072 CAACGGAGTGCCCAGTCGGCCTTCTTGCGGATACAGGGGATGGTGTCGATGGCGT--CGA 158015 Query 120886 AGCATGTCGCGCTCGCCCTCCTCCGCAATCAGCTGATG--------GATGAGCAGATTGT 120937 || | || | | ||| | || | || ||||||| ||||||||| || Sbjct 158014 AG-AGGT-GTGATCG--TTGCT-TGGGGTC-GCTGATGTACGTGTCGATGAGCAGCGAGT 157961 Query 120938 ACATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCA 120997 ||||||| | ||| | | || |||| | || | ||| ||| | |||| || Sbjct 157960 ACATTTCGGAGTGGATGTTTTCCATCATGATCTGGAAGCCGTAGAAGCAACGCGCTTCGG 157901 Query 120998 GCTCGGGCACCGC-CCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGCG 121056 | | | ||| | ||| | | | ||||| ||||| || ||||| | ||||| Sbjct 157900 GGACCTGGACCTCGCCGGAG-AAGCGCTCGAGGAGGTTCTCGTTGACGATGCCGTCGGAC 157842 Query 121057 GCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAG 121109 ||||||||||| || |||||||| || |||| ||||||||||| |||| Sbjct 157841 GCGGCGAAGAAGGCGAGCACGTGTGAAATGAAGTACCGCTCGTCGTCGTTGAG 157789 >seq46 Length=1539107 Score = 120 bits (132), Expect = 3e-22 Identities = 133/175 (76%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||||| || ||||| || ||||| |||| || ||| ||| | || ||||||||||||| Sbjct 989029 GGTGGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCA-TCTTCGAGCTGCTTGC 989087 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| || |||||||| ||||| |||||||||||||| ||||| || Sbjct 989088 CAGCAAAGATGAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGCTCT 989147 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | |||| ||||| | || ||| || || | ||||| ||| |||||||| Sbjct 989148 TGACGTTGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 989202 Score = 118 bits (130), Expect = 1e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || |||| || ||||||||||| || ||||| || || || ||| | ||||| || Sbjct 988793 AAGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGAGTACGACCA-TCCTCAAG 988851 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | || || || ||||||||||| |||||||| |||||||| || Sbjct 988852 CTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGAAT 988911 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | ||||| | | ||| || |||| |||| ||| ||||| Sbjct 988912 CTTACTCTTGACATTGTCGATGGTGTCAGATGACTCGACCTCGAGAGTGATGGTCTTGCC 988971 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || ||||| || ||||| Sbjct 988972 AGTGAGAGTCTTGACGAAGATTTGCAT 988998 >seq48 Length=500340 Score = 102 bits (112), Expect = 8e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || || |||||||| ||| | || || || |||||||| || ||||||||||||||| Sbjct 102305 TCTTCCAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGTGGGATGCCTTCCTTG 102364 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | |||| ||||| | | |||||| |||| ||||| | Sbjct 102365 TCTTGGATCTTGCTCTTGACATTGTCAATGGTGTCTGAAGACTCCACCTCGAGGGTGATG 102424 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| || || || || ||||| Sbjct 102425 GTCTTGCCCGTGAGGGTCTTGACGAA 102450 >seq57 Length=1510414 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/105 (80%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || || || ||| | ||| ||| ||| |||||||||||||| Sbjct 1446734 GTCGACTCCTTCTGGATGTTATAGTCGGAGAGGGTGCGACC-GTCTTCGAGCTGCTTGCC 1446676 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 ||| | ||||| |||||||||||||| |||||||| |||||||| Sbjct 1446675 GGCGAAGATGAGACGCTGCTGGTCGGGTGGGATGCCCTCCTTGTC 1446631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420008398440