Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq46 107 5e-18 >seq46 Length=1539107 Score = 107 bits (118), Expect = 5e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || || |||||| | || || || |||||||| |||| Sbjct 988984 CAAGACTCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCTGACACCATCGACAA 988925 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || || || || || ||| ||| | || ||||| Sbjct 988924 TGTCAAGAGTAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAGCAACGCCTGATCTT 988865 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || ||||| | ||| || | || |||||| ||||||||||||| Sbjct 988864 CGCCGGCAAGCAGCTTGAGGATGGTCGTACTCTGTCTGACTACAACATCCAGAAAGAGTC 988805 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| ||| | || || | ||||| Sbjct 988804 TACTCTACACTTGGTGCTGCGTCTTCG 988778 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || |||||||| ||||| ||||| |||||||||||| || ||| Sbjct 988767 CAGATCTTCGTCAAGACTCTCACAGGCAAAACTATCACGTTGGAAGTGGAATCGTCAGAC 988708 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || || || ||| || Sbjct 988707 ACCATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAACAG 988648 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| ||||| |||||||| ||| | || | | ||||||||| | Sbjct 988647 CGATTGATCTTCGCCGGCAAGCAATTGGAAGACGGACGAACGCTCTCAGATTACAACATT 988588 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||| ||||| ||| Sbjct 988587 CAGAAGGAGAGCACTCTGCAC 988567 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | || || | ||| ||||||||||||||||||| || ||||||| || ||| Sbjct 988778 CGAAGACGCAGCACCAAGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGAGTA 988837 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||||| || |||||||| ||||||||||| || ||||| || Sbjct 988838 CGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTG 988881 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || ||||| ||| || ||| ||| | || ||||| || || ||| Sbjct 989142 AAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAACGTCTCATCTTTGCTGGCAAG 989083 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | |||||||| | || ||| ||| |||||| ||||||| || || || |||||| Sbjct 989082 CAGCTCGAAGATGGTCGCACCTTGAGCGACTACAACATCCAGAAGGAATCCACCCTTCAC 989023 Query 206374 CTTGT 206378 ||||| Sbjct 989022 CTTGT 989018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181818816387651