Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 seq46 84.2 2e-11 seq73 82.4 7e-11 >seq2 Length=1003996 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951 || || || || |||||||| || || || || | |||| || | ||| ||| |||| Sbjct 557550 TTAACAACCTGGAACTCGCCAGCAAGAACTCGGC-GAGAGTAGATGTTGGATGTGTAAGG 557492 Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011 ||| || ||||||| || || || || |||| || | || ||||||||| |||| Sbjct 557491 CTCGAAGCACTCATTGTTACCCAAGATCTGGGATGTTGAGGCTGTAGGCATGGGAGCCAG 557432 Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071 || || ||| || || | ||||| | ||| | |||||| | | ||||||||| Sbjct 557431 CAGCAGTGAGTTGCGAACACCGTGTTGAGCGATATCAGCCTTCAGCGAATCCCAGTCCCA 557372 Query 147072 CATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAG 147110 || || || || || |||||||||||||||||||| Sbjct 557371 CAGGTCCGTAGGAGTGACATTCCACATGTCGTACTGGAG 557333 >seq46 Length=1539107 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || || |||||||||||||||| ||| || |||||||||||| || || | | Sbjct 989033 GATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCGAGCTGCTTGCCAGCA 989092 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 |||| ||||| || || || ||||| |||||||| || || Sbjct 989093 AAGATGAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTC 989133 >seq73 Length=165115 Score = 82.4 bits (90), Expect = 7e-11 Identities = 158/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 47046 GAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGC 47105 ||||| || |||||| ||||||| | || | || || ||| |||| | ||||| Sbjct 158317 GAGGCCGTCGCCATCGAGCAGGAGTTCCTCACAGACGCCCTCCCCTGCGCCCTCTTGGGC 158376 Query 47106 ATGAACGCACAGTCT-ATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCA 47164 |||||||| || || ||| | || || ||||| || || ||||| ||| | || Sbjct 158377 ATGAACGC-CAACCTGATGAAGCAGTACATCGAGTTCGTCGCCGATCGCCTGCTCGT--C 158433 Query 47165 GCT-CGGACAA-CCGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATT 47222 ||| || ||| || || || || || ||| || || ||||| || ||| | ||||| Sbjct 158434 GCTATGGGCAACCCCAAGTACTTCAAGTCTCAGAACCCCTTTGACTTCATGGAGAACATC 158493 Query 47223 TCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 || |||| ||||| || || || |||||||| || ||||| || || Sbjct 158494 TCTCTCGCTGGCAAGACAAACTTCTTCGAGAAGCGTGTCGGTGACTA 158540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610419549160