Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq73 255 8e-62 >seq73 Length=165115 Score = 255 bits (282), Expect = 8e-62 Identities = 429/605 (71%), Gaps = 23/605 (4%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 ||||| |||| | || ||||| |||||||| ||||| |||||| || ||||| | Sbjct 157639 GAGCCATTGCTTCAGGAAAACCCCAACCGCTTCGTCCTCTTCCCCCTCAAGTACCATGAG 157698 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 || ||| |||||||| | |||| | || || ||| |||||||| || || |||||||| Sbjct 157699 ATCTGGCAAATGTACAAGAAAG-CAGAAGCTAGCTTCTGGACCGCAGAAGAAGTCGACCT 157757 Query 1455836 CGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCAA 1455892 | | || |||||| ||| | | |||||||||||| | ||||| Sbjct 157758 CTCCCAAGATCTACAACACTGGCACCACCGCCTCAACGACGACGAGCGGTACTTCATTTC 157817 Query 1455893 GCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCC 1455952 ||||| |||||||| || |||||| ||| |||||||| ||||||||| || | Sbjct 157818 ACACGTGCTCGCCTTCTT-CGCCGCGTCCGACGGCATCGTCAACGAGAACCTCCTCGAGC 157876 Query 1455953 GCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCA 1456012 |||| |||||||| | || || || |||| || ||||| ||||||||| | Sbjct 157877 GCTTCTCCGGCGAGGTCCAGGTCCCCGAAGCGCGTTGCTTCTACGGCTTCCAGATCATGA 157936 Query 1456013 TCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGG 1456072 | |||||||||||||| |||| |||||||| || |||||||| ||| ||| ||||| Sbjct 157937 TGGAAAACATCCACTCCGAAATGTACTCGCTGCTCATCGACACGTACATCAGCGACCC-- 157994 Query 1456073 TCGAG-AAGGA--CCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGG 1456129 | || || || |||||||| |||||||||||| | || | | | || |||| Sbjct 157995 -CAAGCAACGATCACACCTCTTCGACGCCATCGACACCATCCCCTGTATCCGCAAGAAGG 158053 Query 1456130 CCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186 |||||||||| | ||||| | ||||| | ||||| ||| || |||| || Sbjct 158054 CCGACTGGGCACTCCGTTGGATCTCCGACAAGCA----ATCGAC-CTTCGCGCAGCGCCT 158108 Query 1456187 CGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTT 1456244 ||||| || ||||| ||||| |||||||| ||||| ||| ||| ||| ||||||| | Sbjct 158109 CGTCGCATTCGCCGCAGTCGAAGGCATCTTCTTCTCCGGCTCCTTC-GCGTCCATCTTCT 158167 Query 1456245 GGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGC 1456304 |||||||||| ||||| || |||||||| | || ||| |||||| | ||| ||| Sbjct 158168 GGCTCAAGAAACGCGGTCTGATGCCCGG-CCTCACCTTCTCCAACGAGCTCATCTCCCGC 158226 Query 1456305 GACGA 1456309 ||||| Sbjct 158227 GACGA 158231 Score = 95.1 bits (104), Expect = 2e-13 Identities = 176/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||||||||||||||||| |||||| | ||||| ||| || | || || || Sbjct 158308 ATCATCGTCGAGGCCGTCGCCATCGAGCAGGAGTTCCTCACAGACGCCCTCCCCTGCGCC 158367 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 ||| | ||||||||||||| | || ||| |||||||| | | || |||||||| |||| Sbjct 158368 CTCTTGGGCATGAACGCCAAC-CTGATGAAGCAGTACATCG-AGTTCGTCGCCGATCGCC 158425 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||||| || | ||| | ||| ||| | | | ||||| || | ||| Sbjct 158426 TGCTCGTCGCTATGGGCAAC-CCCAAGTACTTCAAGTCTCAGAACCCCTTTGACTTCATG 158484 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 ||| ||||| |||| |||||||| ||||| |||||| || || || || ||| Sbjct 158485 GAGAACATCTCTCTCGCTGGCAAGACAAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 158544 Query 1456762 AAGGCCGGCGTCA 1456774 ||||| || |||| Sbjct 158545 AAGGCAGGTGTCA 158557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177798564809222