Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2 102 1e-16 seq73 96.9 5e-15 >seq2 Length=1003996 Score = 102 bits (112), Expect = 1e-16 Identities = 451/705 (64%), Gaps = 8/705 (1%) Strand=Plus/Minus Query 69503 GTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTG 69562 ||||| | |||| ||||| || || || | |||||| | | || || || || |||| Sbjct 556749 GTGTACAGAGCC--TCGAACTCTTCGCCGTACACATCAGCTAGACCTGGGCACTCGTTTG 556692 Query 69563 GACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCC 69622 | ||||||| || ||| | | | | || || || | ||| || | ||| || ||| Sbjct 556691 GGCACATCAGTGTCCAATCTTGGTTCTTCTCCACACGCTGCATGAACAAATCAGGCGTCC 556632 Query 69623 AAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGA 69681 | | ||| || || || |||| | | ||||| || || || || || Sbjct 556631 ACA-AGCCGTAGAACAGGTCTCGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGTAGG 556573 Query 69682 TCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGT 69741 | ||||||||| | ||||||| |||||||| || || || | || | | ||||| Sbjct 556572 TTGAGAAACTCGAAGATATCAGCGTGCCATGGCTCGAGGTACACGGCAAATGCACCCGGA 556513 Query 69742 CGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGA 69801 || || || || || ||||| | || | |||||||| || ||||||||||||| ||| Sbjct 556512 CGCTTGTTGCCACCTTGATCAACATAGCGAGCAGTGTTGTTGAAGACTCTCAGCATGGGA 556453 Query 69802 ATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTA 69861 || | ||||| || |||| ||||| || | ||| || || | || || || | Sbjct 556452 ATGAGGCCATTGGAGGTACCGTTTGTGCCCGCAATGTAGGAGCCAGTGGCACGGAT-GCA 556394 Query 69862 CTAATAGAT-AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGT 69920 | | | | ||||| | || || || | || ||||| | ||||| || | || Sbjct 556393 GTGAGCGTTGAGACCAACACCACCAGCACTCTTTGAGATCATGGCACATGTCTTGAGAGT 556334 Query 69921 GTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTG 69980 || || || || || ||||| || |||||| | || || || |||| ||| Sbjct 556333 ATCGTAGATGCCATCAATGCTGTCCGACTTCATGTCGATGAGGAAGCAAGACGACAGTTG 556274 Query 69981 ATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA 70040 | || || || || || | ||| || || ||||| ||||| || | || Sbjct 556273 TGGGTGGGGCGTGCCAGCTGCGAACAGTGTTGGTGAGGCGTGTGTGAAGGTCTTCTGGGA 556214 Query 70041 AAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGA 70099 | || ||||| || || || || || | || ||| | || || || | |||| Sbjct 556213 CAAGAGGTTGTAGGTCTCGATGGCCTTCTCAACGTCGTCACCG-TGGATGCCAACAGCGA 556155 Query 70100 CACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATG 70159 ||||||||||||| |||||||||| || || || || || || | |||||||| Sbjct 556154 CACGCATCAACATGTGCTGAGGTCTCTCGGCCACCTTCTTGCCGATCTTGAGCAGGTATG 556095 Query 70160 ATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTC 70204 || || || || || || || || || | ||| ||||||| Sbjct 556094 ATCGCTCAAGTGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTC 556050 >seq73 Length=165115 Score = 96.9 bits (106), Expect = 5e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 39610 CATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAA 39669 || || |||||||||||| || | |||||| || | || | ||||| || || Sbjct 158262 CAGTAGGCAGGCGAAGTCGGTGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAA 158203 Query 39670 TGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGA 39729 ||||| || ||||| ||||| || || |||||||| || |||| || || || || || Sbjct 158202 GGTGAGGCCGGGCATCAGACCGCGTTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCGGA 158143 Query 39730 AAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 |||||||||||||| ||||| || ||||| || || Sbjct 158142 GAAGAAGATGCCTTCGACTGCGGCGAATGCGACGAG 158107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907675186840