Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 214 2e-50 >seq2 Length=1003996 Score = 214 bits (236), Expect = 2e-50 Identities = 894/1397 (64%), Gaps = 37/1397 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||| | |||||| || || ||||| ||||| ||||||||||| || | || || Sbjct 557512 GTAGATGTTGGATGTGTAAGGCTCGAAGCACTCATTGTTACCCAAGATCTGGGATGTTGA 557453 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 |||||| ||||| || |||| || || ||| |||| ||| | | ||| | Sbjct 557452 GGCTGTAGGCATGGGAGCCAGCAGCAGTGAGTTGCGAACACCGTGTTGAGCGATATCAGC 557393 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCTT-GGTTTCACCTTCCCACATGTCAAACTGAA 110885 ||| || ||||||||| | | | | || | || |||| ||||||| |||| | Sbjct 557392 CTTCAGCGAATCCCAGTCCCACAGGTCCGTAGGAGTGACATTCC-ACATGTCGTACTGGA 557334 Query 110886 GCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCA 110945 | | ||||| || | || || |||| | | || || || | || | ||| |||| Sbjct 557333 GGATGCCTTGTGAGACAGGTGAGCCCTGATATGTCTCGTACGGGCCAAGCTCTTTCGCCA 557274 Query 110946 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 111005 | | || || || | || || || || || |||||||| | || | || Sbjct 557273 GTGCGCACGAAGCTGTGAGAGCAGCATGGTAGATAGTCTCAAAGATCTGTATGTTGAGCT 557214 Query 111006 CCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCT 111064 | | |||||| || ||||||| |||| | | || || |||| ||||||||| Sbjct 557213 GCCTTGCTTCAGGAGAGTCAAATG-GTAGACGAAGTGCAAGGAAGGCATCGGCGAGACCT 557155 Query 111065 TGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGA 111124 || ||||| | ||| || |||| ||||| | || ||| || ||||| || Sbjct 557154 TGGACACCAAGACCGATGGGTCGGTGTCTGAAGTTGCTCTTCTTGGCTTCTTCAACAGGG 557095 Query 111125 TAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGA 111184 || | || |||| |||| ||| | || ||| |||| | | || || || Sbjct 557094 TAGTAGTTGATGTCGATGATCTTGTTCAAGTTGCGGGTCACAACTTGAGCGACCTCGTGC 557035 Query 111185 AGTTTT------TCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 111238 || || || ||| | || | || ||| || || || || || | Sbjct 557034 AGACGACCGAAGTCGTATTCACCA---CGGGACTGGTCAACGA-ATGCT--GGCAGCGAC 556981 Query 111239 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 111298 | || ||||| ||||| ||||| ||||||| | | |||||||| | || || || Sbjct 556980 AAAGAAGCCAAGTTGCAGACAGCGACCTCATCCGGAGCAGTGTACTCGATGATCTCAGTG 556921 Query 111299 CATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCA 111358 || |||||||| ||| || || || | || || ||||| ||| |||||| ||| Sbjct 556920 CACAAGTTGGAGCTCCGGATGGTGCCAAGGTTTTTCTGGTTGGACTTGCGGTTGCAAGCA 556861 Query 111359 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA- 111417 ||||||||||||||||| || || || || || ||||| | | |||||| || | ||| Sbjct 556860 TCCTTGTAGAGCATGTATGGGGTGCCGGTTTCGGTCTGAGCCTCGAGAATGGCGTACCAG 556801 Query 111418 AACATCGGCGGCTGGTACAATGG-CG--TTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474 | | | | || | |||| || | | || || || |||||| | ||||| Sbjct 556800 AGCTTTTG----TGCTTTGATGGTCGACCTACCACGACCTTCTTGCTCGTATCTGGTGTA 556745 Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534 || || || ||||| || || | | || | |||||||| || || ||| || | Sbjct 556744 CAGAGCCTCGAACTCTTCGCCGTACACATCAGCTAGACCTGGGCACTCGTTTGGGCACAT 556685 Query 111535 AAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 111592 || | ||| | | ||| ||| || |||| |||||| | || || |||||| | Sbjct 556684 CAGTGTCCAAT--CTTGGTTCTTCTCCACACGCTGCATGAACAAATCAGGCGTCCACAAG 556627 Query 111593 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 111652 | || || |||| | || ||||||| | || ||||| |||| | || Sbjct 556626 CCGTAGAACAGGTCTCGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGTAGGTTGAGA 556567 Query 111653 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC 111712 ||||| | |||||| |||||||||||||| || || || || | | ||| ||||| Sbjct 556566 AACTCGAAGATATCAGCGTGCCATGGCTCGAGGTACACGGCAAATGCACCC---GGACGC 556510 Query 111713 ------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 111766 ||| |||||| |||||||| || ||| ||| || || | ||||| ||||| Sbjct 556509 TTGTTGCCACCTTGATCAACATAGCGAGCAGTGTTGTTGAAGACTCTCAGCATGGGAATG 556450 Query 111767 ATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGG 111826 | |||| || ||| ||||| ||| ||| || | |||| | | || Sbjct 556449 AGGCCATTGGAGGTACCGTTTGTGCCCGCAATGTAGGAGCCAGTGGCACGGATGCAGTGA 556390 Query 111827 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCA 111886 || | |||| ||| ||||| | ||||||||| ||||| | | ||||| | Sbjct 556389 GCGTTGAGACCAACACCACCAGCACTCTTTGAGATCATGGCACATGTCTTGAGAGTATCG 556330 Query 111887 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 111946 ||||| || | || |||| ||| || |||| ||||||||| |||| || || Sbjct 556329 TAGATGCCATCAATGCTGTCCGACTTCATGTCGATGAGGAAGCAAGACGACAGTTGTGGG 556270 Query 111947 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATC 112006 || || ||||| ||| || ||||||| ||||| |||| | ||||||| Sbjct 556269 TGGGGCGTGCCAGCTGCGAACAGTGTTGGTGAGGCGTGTGTGAAGGTCTTCTGGGACAAG 556210 Query 112007 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGC 112066 || ||| ||||| | | | |||| ||| || ||||||||||| | ||||| ||| Sbjct 556209 AGGTTGTAGGTCTCGATGGCCTTCTCAACGTCGTCACCGTGGATGCCAACAGCGACACGC 556150 Query 112067 ATGAACATGTACTGTGG 112083 || ||||||| ||| || Sbjct 556149 ATCAACATGTGCTGAGG 556133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030971597600