Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 273 3e-68 seq73 140 4e-28 seq23 98.7 1e-15 >seq2 Length=1003996 Score = 273 bits (302), Expect = 3e-68 Identities = 902/1390 (65%), Gaps = 23/1390 (2%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| |||| ||||| ||||| ||||||||||||||||||||||| |||| ||| ||| Sbjct 557511 TAGATGTTGGATGTGTAAGGCTCGAAGCACTCATTGTTACCCAAGATCTGGGATGTTGAG 557452 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 ||||| |||||||| |||| || || ||| || | ||| | || || || Sbjct 557451 GCTGTAGGCATGGGAGCCAGCAGCAGTGAGTTGCGAACACCGTGTTGAGCGATATCAGCC 557392 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 118361 || || | |||||||| | | | | | | | |||||| || |||||||| Sbjct 557391 TTCAGCGAATCCCAGTCCCACAGGTCCGTAGGAGTGACATTCCACATGTCGTACTGGAGG 557332 Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTC---CGCC 118418 || ||||| || | || || |||| | ||||||| || ||||| || ||| |||| Sbjct 557331 ATGCCTTGTGAGACAGGTGAGCCCTGATATGTCTCGTACGGGCC---AAGCTCTTTCGCC 557275 Query 118419 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT- 118477 | | || | || ||| || || || || || || ||||| || | || | Sbjct 557274 AGTGCGCACGAAGCTGTGAGAGCAGCATGGTAGATAGTCTCAAAGATCTGTATGTTGAGC 557215 Query 118478 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACC 118537 ||||||| | || || ||||| | || || || || |||| |||||||| Sbjct 557214 TGCCTTG-CTTCAGGAGAGTCAAATGGTAGACGAAGTGCAAGGAAGGCATCGGCGAGACC 557156 Query 118538 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGG 118597 ||||||||| || || || || || ||||| | || |||| || || || || Sbjct 557155 TTGGACACCAAGACCGATGGGTCGGTGTCTGAAGTTGCTCTTCTTGGCTTCTTCAACAGG 557096 Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657 || | || | ||||| | | | || | || ||| ||||| | | || || || Sbjct 557095 GTAGTAGTTGATGTCGATGATCTTGTTCAAGTTGCGGGTCACAACTTGAGCGACCTCGTG 557036 Query 118658 AAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 118714 || || | || | || || | || ||| || || || || || | | Sbjct 557035 CAGACGACCGAAGTCGTATTCACCACGGGACTGGTCAACGA-ATGCT--GGCAGCGACAA 556979 Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774 || |||| || || |||| | ||||||| | |||||||||| || || || ||||| Sbjct 556978 AGAAGCCAAGTTGCAGACAGCGACCTCATCCGGAGCAGTGTACTCGATGATCTCAGTGCA 556919 Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834 |||||| || ||| |||||||| | ||| || || || ||||| ||| || ||||| Sbjct 556918 CAAGTTGGAGCTCCGGATGGTGCCAAGGTTTTTCTGGTTGGACTTGCGGTTGCAAGCATC 556859 Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 118894 |||||| ||||||||||| || || || || || || | || |||||| || | ||||| Sbjct 556858 CTTGTAGAGCATGTATGGGGTGCCGGTTTCGGTCTGAGCCTCGAGAATGGCGTACCAGAG 556799 Query 118895 ATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGC 118954 | ||| | || | | | || || |||| |||||| | ||||| || || Sbjct 556798 CTTTTGTGCTTTGATGGTCGACCTACCACGACCTTCTTGCTCGTATCTGGTGTACAGAGC 556739 Query 118955 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 119014 || |||||||| || | || | || ||||| || | |||||| | || | Sbjct 556738 CTCGAACTCTTCGCCGTACACATCAGCTAGACCTGGGCACTCGTTTGGGCACATCAGTGT 556679 Query 119015 CCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG-AGA 119073 ||| | || ||| || |||| |||||| | || || |||| | |||| ||| Sbjct 556678 CCAATCTTGGTTCTTCTCCACACGCTGCATGAACAAATCAGGCGTCCACAA-GCCGTAGA 556620 Query 119074 AGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCA 119133 | || || ||| ||| | ||||| | || || || || | | | ||| || | Sbjct 556619 ACAGGTCTCGAGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGTAGGTTGAGAAACTCGA 556560 Query 119134 TGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA---CCAG 119190 |||||| |||||||| || || |||||||| || | || ||| ||| ||| Sbjct 556559 AGATATCAGCGTGCCATGGCTCGAGGTACACGGCAAATGCACCCGGACGCTTGTTGCCAC 556500 Query 119191 CCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGG 119250 | || | ||||| | |||||| ||| || || | ||||| ||||||| |||| || Sbjct 556499 CTTGATCAACATAGCGAGCAGTGTTGTTGAAGACTCTCAGCATGGGAATGAGGCCATTGG 556440 Query 119251 ATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCAT 119308 | || ||||| ||| ||| | ||| | | |||| | || ||| || | Sbjct 556439 AGGTACCGTTTGTGCCCGCAATGTAGGAGCC--AGTGGCACGGATGCAGTGAGCGTTGAG 556382 Query 119309 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 119368 ||||| ||| || || | ||||||||| || || | ||||| | ||||||| || Sbjct 556381 ACCAACACCACCAGCACTCTTTGAGATCATGGCACATGTCTTGAGAGTATCGTAGATGCC 556322 Query 119369 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGT 119428 ||| || ||| ||| | ||||||||||||| ||||| ||| || ||| || Sbjct 556321 ATCAATGCTGTCCGACTTCATGTCGATGAGGAAGCAAGACGACAGTTGTGGGTGGGGCGT 556262 Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTA 119488 ||||| ||| || ||||||| ||||| |||| | ||||||| || ||| Sbjct 556261 GCCAGCTGCGAACAGTGTTGGTGAGGCGTGTGTGAAGGTCTTCTGGGACAAGAGGTTGTA 556202 Query 119489 GGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACAT 119548 |||||| | | | || ||| || ||||| || || | | ||| ||||| ||||| Sbjct 556201 GGTCTCGATGGCCTTCTCAACGTCGTCACCGTGGATGCCAACAGCGACACGCATCAACAT 556142 Query 119549 GTATTGGGGT 119558 || || ||| Sbjct 556141 GTGCTGAGGT 556132 >seq73 Length=165115 Score = 140 bits (154), Expect = 4e-28 Identities = 561/868 (65%), Gaps = 13/868 (1%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||||||||| || | | ||| |||||||| Sbjct 158540 TAGTCACCGACACGCTTCTCGAAGAAGTTTGTCTTGCCAGCGAGAGAGATGTTCTCCATG 158481 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACT-CCAATCTGTTTGAGGAGACG 129846 || ||||| ||||||| || || || | ||| | || || ||| || || Sbjct 158480 AAGTCAAAGGGGTTCTGAGACTTG-AAGTACTTGGGGTTGCCCATAGCGACGAGCAGGCG 158422 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | |||| |||| ||||||| |||| | || |||||| || | |||| || Sbjct 158421 ATCGGCGACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAAGAGGGCGCA 158362 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 ||||| ||||| || |||| ||| ||| ||| | || || || | |||||| || Sbjct 158361 GGGGAGGGCGTCTGTGAGGAACTCCTGCTCGATGGCGACGGCCTCGACGATGATGGCCTG 158302 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAG-AGTTCCACGGCAAACTCCT 130025 |||| || | | ||| ||| | || || ||| ||| || || Sbjct 158301 GATGG-CTTCTTTTGAGGGGCGGTGCTTGAGGTGGGAGAGCAGTAGGCAGGCGAAGTCGG 158243 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 ||| | |||||||| ||||||||||| || || |||||| || || ||||| |||| Sbjct 158242 TGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGAC 158183 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | || ||||| | |||||| || | || ||||| ||||||||||| || || || Sbjct 158182 CGCGTTTCTTGAGCCAGAAGATGGACGCGAAGGAGCCGGAGAAGAAGATGCCTTCGACTG 158123 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATC 130204 ||||| || | ||| |||| || |||| || |||| | | ||| | Sbjct 158122 CGGCGAATGCGACGAGGCGCTGCGCGAAGG-TCGATTGCTTGTCGGAGATCCAACGGAGT 158064 Query 130205 GCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA-GTTCCTT 130263 ||||| | ||||| || |||||| |||| ||| | ||| || || |||| || | Sbjct 158063 GCCCAGTCGGCCTTCTTGCGGATACAGGGGATGGTGTCGATGGCGTCGAAGAGGTGTGAT 158004 Query 130264 CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGAC 130323 | || || || || |||||||| | || ||||| || || ||||| |||| Sbjct 158003 CGTTGCT-TGGGGTCGCTGATGTACGTGTCGATGAGCAGCGAGTACATTTCGGAGTGGAT 157945 Query 130324 CATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 130382 ||| ||| || | ||| | ||||||| | ||||||||| | ||| ||||| Sbjct 157944 GTTTTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGCGCTTCGGGGACCTGGACCTCGC 157886 Query 130383 CTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCA 130442 | | || | || ||||| || || || |||||| | || || || || | Sbjct 157885 CGGAGAAGCGCTCGAGGAGGTTCTCGTTGACGATGCCGTCGGACGCGGCGAAGAAGGCGA 157826 Query 130443 GGATATACTTTATGAATTTCTGTTCATTCTCGTTCAG--GGT-CTTCCAGTCGTCAAGAT 130499 | | | ||||| | | | || | ||||| || ||| | ||||| | |||| Sbjct 157825 GCACGTGTGAAATGAAGTACCGCTCGTCGTCGTTGAGGCGGTGGTGCCAGTGTTGTAGAT 157766 Query 130500 CCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTCTTATAGAGTT 130559 | | ||||| || || || || || ||||| ||| || || ||||| || | || Sbjct 157765 CTTGGGAGAGGTCGACTTCTTCTGCGGTCCAGAAGCTAGCTTCTGCTTTCTTGTACATTT 157706 Query 130560 CCCAGAGGTGGGGATACTTCAGGGGGAA 130587 ||||| | | ||||| |||||||| Sbjct 157705 GCCAGATCTCATGGTACTTGAGGGGGAA 157678 >seq23 Length=959784 Score = 98.7 bits (108), Expect = 1e-15 Identities = 237/356 (67%), Gaps = 12/356 (3%) Strand=Plus/Minus Query 179758 TGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATA 179817 |||| | ||||| || ||| || || || || |||||| | |||| ||||||||| Sbjct 339968 TGGAGAAAATTGATGAGGAGTCCTTTGATATGACTACCATCATGATCCTGATCCGTCATG 339909 Query 179818 ATCATAAGCCGACCATAGCGAAGCTCGGAAAC---ATCTTGATAATCCTTACCTTGTTGA 179874 |||||||| | ||||| || || ||| ||| | ||| |||| |||||| Sbjct 339908 ATCATAAGGTGGCCATACCGCAG---GGACCGCGTATCCTCATAGACCTTCTTGTGTTGA 339852 Query 179875 AGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAA 179934 |||||||||| ||||| | |||||| ||| || | || || | || | | Sbjct 339851 AGACCCAAGAATGACTTGATAGCATTGATCTCAGCATTCTTCGAGATCTGATCAACGGTA 339792 Query 179935 GCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCA 179994 || || || || || | ||| || || || |||||||||||| |||| || || Sbjct 339791 GCGTCGCGTACGTTAAGAATCTTTCCTCGAAGCGGGAACACACCGAAGTGGTCCGGAGAG 339732 Query 179995 ACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGC 180054 || |||| ||||||| | || || ||| || || |||||||| || | |||||| Sbjct 339731 ACAACAGCACGACCAGCCATGGCAAGACCCTTGGCAGAGTCACCCTCAGTGAGGATGAGA 339672 Query 180055 GTACA---CTTTCCAGATTGTGCCGTCCCTGCCTTGTTCGCGTCGTCCAACTTGGG 180107 || || | ||||| || || || || ||||| || ||| ||||||| || Sbjct 339671 GTGCAGAGATGGCCAGA---AGCAGTGCCAGCTTTGTTGGCATCGACCAACTTTGG 339619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434187312360