Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2 354 9e-93 seq73 102 9e-17 >seq2 Length=1003996 Score = 354 bits (392), Expect = 9e-93 Identities = 1136/1745 (65%), Gaps = 37/1745 (2%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 ||||||||||| |||||||||||| ||||||| || | |||||| || | | |||| Sbjct 557850 TAGTACATGCCAGTCTTGAGACCCATCTTCCAGCCAGCGAAGTGCATGCTGGTAATCTTG 557791 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 ||| |||| | || || | ||||||||| ||||| ||||| |||||| | ||||| Sbjct 557790 CCCATCGTCGGCTCCTTCAAGTGGATGTTGAGTGACTGAGACTGATCGATGAAGGCACCA 557731 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 ||||| || ||||| | | || | ||| | |||||||| | ||| ||||| Sbjct 557730 CGGTCAGCAGCCATCTGCAGAACAGTACGTTGTGAGATCTCCCACACTGTCTTGTAAAGT 557671 Query 78379 GCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTACGCTCCCACCGGCTCGCA-CAAT--T 78435 ||||| | || || ||| || || | | | | ||| | | || |||| | Sbjct 557670 GCCTTGATGTCAGCCGGGACGTTTGGCACATTCTGGATAGAGCCGCC-CTCAGCAATGAT 557612 Query 78436 TCA-TTCTTAAT-TTGAGGGTTCC--AGC-GATTGATCTTCTGAAGATCCCGGACCAGGT 78490 | ||||| || ||| | | ||| || |||| | || ||| || ||| Sbjct 557611 GCGGTTCTTCATGTTGTCTGACCACAAGCCGA--GATCGACC--AGGTCCTTGAGCAGCC 557556 Query 78491 GCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGT 78550 |||||| | ||||||||| || || ||||| ||||||||||| |||| Sbjct 557555 AGGGGTTAACAACCTGGAACTCGCCAGCAAGAACTCGGCGAGAGTAGATGTTGGATGTGT 557496 Query 78551 ACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTG 78610 | |||||||| ||| ||||| |||| |||||||| || ||||| || |||||||| | Sbjct 557495 AAGGCTCGAAGCACTCATTGTTACCCAAGATCTGGGATGTTGAGGCTGTAGGCATGGGAG 557436 Query 78611 CGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGG------CCGT 78664 | | ||| || || || |||| ||| || ||| || |||| || | || Sbjct 557435 CCAGCAGCAGTGAGTTGCGAACACCGTGTTGAGCGATATCAGCCTTCAGCGAATCCCAGT 557376 Query 78665 CCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCG 78724 |||| | || | | | || ||||||||| || ||||| || | || | | Sbjct 557375 CCCACAGGTCCGTAGGAGTGACATTCCACATGTCGTACTGGAGGATGCCTTGTGAGACAG 557316 Query 78725 GCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCA 78784 | || |||| | |||||||| | || ||| || || ||| |||| || | | Sbjct 557315 GTGAGCCCTGATATGTCTCGTACGGGCCAAGCTCTTTCGCCAGTGCGCACGAAGCTGTGA 557256 Query 78785 GGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGT 78844 | || || ||||| | || ||| ||||| ||||||||| | || | | || Sbjct 557255 GAGCAGCATGGTAGATAGTCTCAAAGATCTGTATGTTGAGCTGCCTTGCTTCAGGAGAGT 557196 Query 78845 CGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCG 78904 | || | || | || | |||| ||||||| || || ||||| || | | |||| | Sbjct 557195 CAAATGGTAGACGAAGTGCAAGGAAGGCATCGGCGAGACCTTGGACACCAAGACCGATGG 557136 Query 78905 GTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGA 78964 ||||||| | | ||||||||| ||| | || ||||| |||| ||||||| Sbjct 557135 GTCGGTGTCTGAAGTTGCTCTTCTTGGCTTCTTCAACAGGGTAGTAGTTGATGTCGATGA 557076 Query 78965 CGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAAT 79024 ||||| ||| || || || || ||| ||||||| || |||| || | | Sbjct 557075 TCTTGTTCAAGTTGCGGGTCACAACTTGAGCGACCTCGTGCAGACGACCGAAGTCGTATT 557016 Query 79025 GATTTC----CT--TTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCG 79078 | | || | | ||| | || || ||| || |||| |||||| || || Sbjct 557015 CACCACGGGACTGGTCAACGAATGCTGGCAGCGACAAAGAAGCCAAGTTGCAGACAGCGA 556956 Query 79079 TCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGC 79138 ||| ||||| || ||||||||| || |||||||| || || | |||||||| Sbjct 556955 CCTCATCCGGAGCAGTGTACTCGATGATCTCAGTGCACAAGTTGGAGCTCCGGATGGTGC 556896 Query 79139 CGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCC 79198 | | ||| ||||||||| ||| ||| || || ||||||||| |||||| || || | Sbjct 556895 CAAGGTTTTTCTGGTTGGACTTGCGGTTGCAAGCATCCTTGTAGAGCATGTATGGGGTGC 556836 Query 79199 CGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA----CAACC 79254 |||| || |||| || ||||| | ||| ||||| | | || || | ||| Sbjct 556835 CGGTTTCGGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTTTGTGCTTTGATGGTCGACC 556776 Query 79255 TTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAG 79314 | | ||||| | | |||| | ||||| | | ||| | || || || Sbjct 556775 TACCA----CGACCTTCTTGCTCGTATCTGGTGTACAGAGCCTCGAACTCTTCGCCGTAC 556720 Query 79315 ACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCA 79374 ||||| | || || |||||||||| ||||||||||| ||| || | || |||||| Sbjct 556719 ACATCAGCTAGACCTGGGCACTCGTTTGGGCACATCAGTGTCCAATCTTGGTTCTTCTCC 556660 Query 79375 ACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGT-GAAGAGGTCGCGGCAACGCAT 79433 || || |||||| | || || |||||| | |||| ||| ||||| || || | Sbjct 556659 ACACGCTGCATGAACAAATCAGGCGTCCACAAG-CCGTAGAACAGGTCTCGAGCGCGGAC 556601 Query 79434 CTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGG 79493 ||| || | ||| |||||| || || | |||||| || | ||| || |||||||| || Sbjct 556600 CTCTTCCTTGCCGTGGTTCTTGCGTAGGTTGAGAAACTCGAAGATATCAGCGTGCCATGG 556541 Query 79494 CTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGC 79553 ||| || || | ||| || | |||| |||||| ||| || || | || || || || Sbjct 556540 CTCGAGGTACACGGCAAATGCACCCGGACGCTTGTTGCCACCTTGATCAACATAGCGAGC 556481 Query 79554 CGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTT 79613 ||||||||||| |||| |||||||| | || ||| | || | ||||| || || Sbjct 556480 AGTGTTGTTGAAGACTCTCAGCATGGGAATGAGGCCATTGGAGGTACCGTTTGTGCCCGC 556421 Query 79614 GATTCGTGTACCGCTCGCCCGAATG-TTCGAGCAGTGGATTCCGATGCCCCCGGACCACT 79672 || | || | || || ||| |||| || || || | || || | | || Sbjct 556420 AATGTAGGAGCCAGTGGCACGGATGCAGTGAGC-GTTGAGACCAACACCACCAGCACTCT 556362 Query 79673 TGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCA 79732 | ||||| || || |||||| || ||||||||||| || || ||| ||||| Sbjct 556361 TTGAGATCATGGCACATGTCTTGAGAGTATCGTAGATGCCATCAATGCTGTCCGACTTCA 556302 Query 79733 TAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCG 79792 | ||| |||||||| ||||| ||||||| | ||| || || ||| || || | Sbjct 556301 TGTCGATGAGGAAGCAAGACGACAGTTGTGGGTGGGGCGTGCCAGCTGCGAACAGTGTTG 556242 Query 79793 GCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGA 79852 | | ||||| |||||| ||| ||| || || | ||| ||||| || | | | Sbjct 556241 GTGAGGCGTGTGTGAAGGTCTTCTGGGACAAGAGGTTGTAGGTCTCGATGGCCTTCTCAA 556182 Query 79853 GGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGGCGTCTCGCCGA 79912 |||||| ||||||||||| || ||||| ||||| || | || ||| || ||||| | | Sbjct 556181 CGTCGTCACCGTGGATGCCAACAGCGACACGCATCAACATGTGCTGAGGTCTCTCGGCCA 556122 Query 79913 CATTC 79917 | ||| Sbjct 556121 CCTTC 556117 Score = 340 bits (376), Expect = 2e-88 Identities = 1134/1746 (65%), Gaps = 39/1746 (2%) Strand=Plus/Plus Query 19097 GAGACGCCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCG 19156 |||| |||||| || | || ||||| ||||| || |||||||| || |||||| | | Sbjct 556127 GAGAGACCTCAGCACATGTTGATGCGTGTCGCTGTTGGCATCCACGGTGACGACGTTGAG 556186 Query 19157 CGAGTCCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACC 19216 | | |||||| ||| |||| || ||||||| |||||| ||||| | || || Sbjct 556187 AAGGCCATCGAGACCTACAACCTCTTGTCCCAGAAGACCTTCACACACGCCTCACCAACA 556246 Query 19217 CTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAG 19276 || ||| || || ||| | |||| || ||||| || ||||| | | |||||| Sbjct 556247 CTGTTCGCAGCTGGCACGCCCCACCCACAACTGTCGTCTTGCTTCCTCATCGACATGAAG 556306 Query 19277 GATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGG 19336 ||||||||||| ||||||||||| || |||||| || || ||||| ||| | Sbjct 556307 TCGGACAGCATTGATGGCATCTACGATACTCTCAAGACATGTGCCATGATCTCAAAGAGT 556366 Query 19337 TCCGGGGGTATCGGGATCCACTGCTCGAAT--ATCCGGTCGAGTGGTACACGAATCAATG 19394 | || ||| | || || || |||| | | ||||| | | ||| | || | Sbjct 556367 GCTGGTGGTGTTGGTCTCAAC-GCTC-ACTGCATCCGTGCCACTGGCTCCTACATTGCGG 556424 Query 19395 GGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCA 19454 | || ||||| || | || || | || ||||| | |||||||||||||| || Sbjct 556425 GCACAAACGGTACCTCCAATGGCCTCATTCCCATGCTGAGAGTCTTCAACAACACTGCTC 556484 Query 19455 GGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCAT 19514 | || || | || || ||| ||| || ||| | || ||| | ||||||||||||| Sbjct 556485 GCTATGTTGATCAAGGTGGCAACAAGCGTCCGGGTGCATTTGCCGTGTACCTCGAGCCAT 556544 Query 19515 GGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGC 19574 ||||||| || || | || || ||| | || ||| |||||| || | || ||| | | Sbjct 556545 GGCACGCTGATATCTTCGAGTTTCTCAACCTACGCAAGAACCACGGCAAGGAAGAGGTCC 556604 Query 19575 GCTGTCGCGACCTCTTC-ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAG 19633 || ||| ||||| ||| |||| |||||||| || || | |||||| || || ||| Sbjct 556605 GCGCTCGAGACCTGTTCTACGG-CTTGTGGACGCCTGATTTGTTCATGCAGCGTGTGGAG 556663 Query 19634 AAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTAC 19693 ||| || |||| ||| ||||||||||| |||| ||||| || ||| | || || ||| Sbjct 556664 AAGAACCAAGATTGGACACTGATGTGCCCAAACGAGTGCCCAGGTCTAGCTGATGTGTAC 556723 Query 19694 GGCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTG 19753 ||||| | |||| | | ||||| | |||| ||| | ||| | |||| Sbjct 556724 GGCGAAGAGTTCGAGGCTCTGTACACCAGATACG-AGC---AAGAAGGTCGTGGTAGGTC 556779 Query 19754 G----TCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCAC 19809 | || || | | ||||| || | | ||| | ||| ||| |||||||| Sbjct 556780 GACCATCAAAGCACAAAAGCTCTGGTACGCCATTCTCGAGGCTCAGACCGAAACCGGCAC 556839 Query 19810 ACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGC 19869 || |||||| ||||||||| || ||| |||||| || ||||| ||| | ||| | Sbjct 556840 CCCATACATGCTCTACAAGGATGCTTGCAACCGCAAGTCCAACCAGAAAAACCTTGGCAC 556899 Query 19870 GATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGC 19929 ||| | |||||| |||| ||||| ||||| ||| | ||||| ||| || Sbjct 556900 CATCCGGAGCTCCAACTTGTGCACTGAGATCATCGAGTACACTGCTCCGGATGAGGTCGC 556959 Query 19930 CGTGTGTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGT---CAAGGCC--TCCT-CCTT 19983 || || || |||| || ||| ||||| | ||||| | || || | | | Sbjct 556960 TGTCTGCAACTTGGCTTCTTTGTCGCTGCCAGCATTCGTTGACCAGTCCCGTGGTGAATA 557019 Query 19984 CGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCAT 20043 |||||| | || ||||||| | | || || || || || |||| |||| Sbjct 557020 CGACTTCGGTCGTCTGCACGAGGTCGCTCAAGTTGTGACCCGCAACTTGAACAAGATCAT 557079 Query 20044 CGATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGAT 20103 ||| |||| ||||| || | || ||| || | | ||||| || || Sbjct 557080 CGACATCAACTACTACCCTGTTGAAGAAGCCAAGAAGAGCAACTTCAGACACCGACCCAT 557139 Query 20104 CGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCT--CATTCGAC 20161 || | || ||||| || || ||||| | ||| | ||| | | ||| |||| ||| Sbjct 557140 CGGTCTTGGTGTCCAAGGTCTCGCCGATGCCTTCCT--TGCACTTCGTCTACCATTTGAC 557197 Query 20162 GATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTC 20221 ||| | || | ||||||||| ||||| ||| | | ||||| || || ||| Sbjct 557198 TCTCCTGAAGCAAGGCAGCTCAACATACAGATCTTTGAGACTATCTACCATGCTGCTCTC 557257 Query 20222 CTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCC 20281 | ||||||| ||| || |||||| |||||||||||||| | |||| || || Sbjct 557258 ACAGCTTCGTGCGCACTGGCGAAAGAGCTTGGCCCGTACGAGACATATCAGGGCTCACCT 557317 Query 20282 GCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAGTTTTGGAGC 20341 | || | || ||||||||| ||||||||| |||||| | || | ||| | Sbjct 557318 GTCTCACAAGGCATCCTCCAGTACGACATGTGGAATGTCACTCCTACGGACCTGTGGGAC 557377 Query 20342 ------GCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCG 20395 | || |||| ||| ||| ||||| |||||||||| |||| | || Sbjct 557378 TGGGATTCGCTGAAGGCTGATATCGCTCAACACGGTGTTCGCAACTCACTGCTGCTGGCT 557437 Query 20396 CCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTAC 20455 |||||||| || ||||| || |||||||| |||| ||||| ||| |||||||| ||| Sbjct 557438 CCCATGCCTACAGCCTCAACATCCCAGATCTTGGGTAACAATGAGTGCTTCGAGCCTTAC 557497 Query 20456 ACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCAC 20515 || |||||||||||| || || || || || |||||| | || ||| Sbjct 557498 ACATCCAACATCTACTCTCGCCGAGTTCTTGCTGGCGAGTTCCAGGTTGTTAACCCCTGG 557557 Query 20516 CTGGTCCGCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAA-TGAA--ATT 20572 ||| || ||| || | ||| ||||||| ||| || ||||| | | ||| Sbjct 557558 CTGCTCAAGGACCTGGTCGATCTCGGCTTGTGGTCAGACAACATGAAGAACCGCATCATT 557617 Query 20573 GTCCGAGCCGGCGGGAGCGTCCAGGCATTG---GATATCCCCCAGAACCTCAAGGACATT 20629 | | ||| ||||| ||||| || | |||| || |||||| || Sbjct 557618 G-CTGAG--GGCGGCTCTATCCAGAATGTGCCAAACGTCCCGGCTGACATCAAGGCACTT 557674 Query 20630 TACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGC 20689 |||| ||| || ||||| ||| |||| | | | | ||||| || || || || Sbjct 557675 TACAAGACAGTGTGGGAGATCTCACAACGTACTGTTCTGCAGATGGCTGCTGACCGTGGT 557734 Query 20690 GCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAG 20749 |||| |||||| ||||| ||||| ||||| || | || || | |||| ||| ||| Sbjct 557735 GCCTTCATCGATCAGTCTCAGTCACTCAACATCCACTTGAAGGAGCCGACGATGGGCAAG 557794 Query 20750 CTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTG 20809 | | | |||||| | |||||| | | ||| |||||||| ||||||||||| || Sbjct 557795 ATTACCAGCATGCACTTCGCTGGCTGGAAGATGGGTCTCAAGACTGGCATGTACTACCTC 557854 Query 20810 CGGACC 20815 || ||| Sbjct 557855 CGTACC 557860 >seq73 Length=165115 Score = 102 bits (112), Expect = 9e-17 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 || ||||| ||||||||||| ||||| ||| | || ||||||||||| || || || Sbjct 158125 GTCGAAGGCATCTTCTTCTCCGGCTCCTTCGCGTCCATCTTCTGGCTCAAGAAACGCGGT 158184 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 || ||||| ||||| | |||||||||||||| || ||||| ||||||||| Sbjct 158185 CTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGC 158235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523901790640