Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq46 131 1e-25 seq57 91.5 9e-14 >seq46 Length=1539107 Score = 131 bits (144), Expect = 1e-25 Identities = 164/220 (75%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || || | |||||| || |||||||||||||| |||||||| |||||||| || ||||| Sbjct 988553 AGGCGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAATCTGAGAGCGTTCGT 988612 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| | ||| || ||||| || || || ||||||||||| || || | |||||| Sbjct 988613 CCGTCTTCCAATTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTGGGATACCCTCC 988672 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCT-TCGCTCTCCACTTCCACGG 34666 ||||| |||| || | || || | || |||||| || | |||||||||| | Sbjct 988673 TTGTCCTGGATC-TTGCTCTTCACATTGTCGATGGTGTCTGACGAT-TCCACTTCCAACG 988730 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || ||||| || || | || || || || |||||||| Sbjct 988731 TGATAGTTTTGCCTGTGAGAGTCTTGACGAAGATCTGCAT 988770 >seq57 Length=1510414 Score = 91.5 bits (100), Expect = 9e-14 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | ||||| || ||||| |||||| || |||||||| || || Sbjct 1446764 CCGCCACGCAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTATAGTCGGAG 1446705 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||| || || || ||||| || || | |||||| ||||| || || Sbjct 1446704 AGGGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGG 1446645 Query 34600 ACTCCCTCCTTGTCT 34614 | |||||||||||| Sbjct 1446644 ATGCCCTCCTTGTCT 1446630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729097514523