Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq46 134 1e-26 seq57 95.1 1e-14 >seq46 Length=1539107 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || ||||| |||| || | ||||||||| |||| Sbjct 988770 ATGCAGATCTTCGTCAAGACTCTCACAGGCAAAACTATCACGTTGGAAGTGGAATCGTCA 988711 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || ||||| || || || ||||| || ||| Sbjct 988710 GACACCATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAA 988651 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 ||||| || || | ||||||||| |||||||||||| | ||| || | || |||||||| Sbjct 988650 CAGCGATTGATCTTCGCCGGCAAGCAATTGGAAGACGGA-CGAACGCTCTCAGATTACAA 988592 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||| |||||| || | || ||||| | || |||| ||||| Sbjct 988591 CATTCAGAAGGAGAGCACTCTGCACTTGGTGCTCCGCCTGCGTGGTGG 988544 >seq57 Length=1510414 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139 |||||| || ||||| |||||||| || |||||| | || | ||||||||| || | || Sbjct 1446630 AGACAAGGAGGGCATCCCACCCGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGA 1446689 Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 |||| || ||| | ||||| || ||||| || ||||||||||| | || ||||| | Sbjct 1446690 AGACGGTCGCACCCTCTCCGACTATAACATCCAGAAGGAGTCGACTCTTCACTTGGTCCT 1446749 Query 27200 GCGTTTGCGGGGTGG 27214 ||| |||| || || Sbjct 1446750 TCGTCTGCGTGGCGG 1446764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917687821120