Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq51 89.7 5e-13 >seq51 Length=425537 Score = 89.7 bits (98), Expect = 5e-13 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 6563 TAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACC-AACCCCACGACATG 6621 || |||||||||||||||| |||||| | || |||||| |||||| || | |||| |||| Sbjct 275418 TAAATATGCGCATCCCCCATCGTATGTATCAACTCCCCCGGAACCAAATCACACG-CATG 275476 Query 6622 AGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCAT 6681 | | ||| | ||| ||| || ||||| ||||| |||||||| | || |||||||| Sbjct 275477 ACACAACATATGCGTAAGCTCCGCATAACTCGCAATATTGAACGGTATACCCAACCCCAT 275536 Query 6682 GTC 6684 || Sbjct 275537 ATC 275539 Score = 89.7 bits (98), Expect = 5e-13 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 34661 GACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATC 34720 || |||||||| || | |||||||| ||||| ||||| || ||| ||| | ||| | Sbjct 275539 GATATGGGGTTGGGTATACCGTTCAATATTGCGAGTTATGCGGAGCTTACGCATATGTTG 275480 Query 34721 GCTCATGTCGTGGGGTT-GGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATAT 34779 ||||| |||| | || |||||| |||||| || | |||||| |||||||||||||||| Sbjct 275479 TGTCATG-CGTGTGATTTGGTTCCGGGGGAGTTGATACATACGATGGGGGATGCGCATAT 275421 Query 34780 CTA 34782 || Sbjct 275420 TTA 275418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261665970320