Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2 107 3e-18 >seq2 Length=1003996 Score = 107 bits (118), Expect = 3e-18 Identities = 545/859 (63%), Gaps = 10/859 (1%) Strand=Plus/Minus Query 77759 GATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAA 77818 ||| ||||| || |||| |||||| ||| ||||| | ||||| || || || | Sbjct 556903 GATGGTGCCAAGGTTTTTCTGGTTGGACTTGCGGTTGCAAGCATCCTTGTAGAGCATGTA 556844 Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTAT 77878 || || |||||||| |||| | |||| ||| | | ||||| | ||||| || Sbjct 556843 TGGGGTGCCGGTTTCGGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTTTGTGCTTTGAT 556784 Query 77879 CATAGATTTGTATCGCCTCTCTCTTTCATATT--GAGTATATAGCCGTTCAAATTCATCT 77936 | || | || | ||| || ||| | ||| | |||| || || || || Sbjct 556783 GGTCGACCTACCACGACCTTCTTGCTCGTATCTGGTGTACAGAGCC--TCGAACTCTTCG 556726 Query 77937 CCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCT 77996 || | |||||| | | || ||||| || ||||||||||||| || ||| || | Sbjct 556725 CCGTACACATCAGCTAGACCTGGGCACTCGTTTGGGCACATCAGTGTCCAATCTTGGTTC 556666 Query 77997 TCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATA-AATAGATCTCGGGT 78055 | || || || | ||| || | |||||| |||| | ||| || || || ||||| | Sbjct 556665 TTCTCCACACGCTGCATGAACAAATCAGGCGTCCACA-AGCCGTAGAACAGGTCTCGAGC 556607 Query 78056 TCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATG 78115 | ||||| || || ||||| || | ||||||||| | ||||||| || Sbjct 556606 GCGGACCTCTTCCTTGCCGTGGTTCTTGCGTAGGTTGAGAAACTCGAAGATATCAGCGTG 556547 Query 78116 CCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATA 78175 |||||| || || || | || | | || || || || || || || ||||| | ||| Sbjct 556546 CCATGGCTCGAGGTACACGGCAAATGCACCCGGACGCTTGTTGCCACCTTGATCAACATA 556487 Query 78176 TCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGT 78235 | || ||||| || | ||||||| ||| ||||| | || || || || || ||||| Sbjct 556486 GCGAGCAGTGTTGTTGAAGACTCTCAGCATGGGAATGAGGCCATTGGAGGTACCGTTTGT 556427 Query 78236 TCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT-ATCCCTATTCCTCCTG 78294 || | ||| || ||| | || || || | | | | | | || | || || | Sbjct 556426 GCCCGCAATGTAGGAGCCAGTGGCACGGAT-GCAGTGAGCGTTGAGACCAACACCACCAG 556368 Query 78295 CCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCAT 78354 | |||| || || | || || || | ||||||||||| || || || ||||| Sbjct 556367 CACTCTTTGAGATCATGGCACATGTCTTGAGAGTATCGTAGATGCCATCAATGCTGTCCG 556308 Query 78355 CCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATA 78414 | |||||| | || || || |||| ||| | || || || || || | Sbjct 556307 ACTTCATGTCGATGAGGAAGCAAGACGACAGTTGTGGGTGGGGCGTGCCAGCTGCGAACA 556248 Query 78415 ATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTG 78474 ||| || || || || || || || | || | || ||||| || || || || Sbjct 556247 GTGTTGGTGAGGCGTGTGTGAAGGTCTTCTGGGACAAGAGGTTGTAGGTCTCGATGGCCT 556188 Query 78475 ATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTT 78533 || | ||| || | || || || || || |||||||||||||| ||||||||||| Sbjct 556187 TCTCAACGTCGTCACCG-TGGATGCCAACAGCGACACGCATCAACATGTGCTGAGGTCTC 556129 Query 78534 TCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAA 78593 || || ||| || || || | || ||||||| || | || || || || || Sbjct 556128 TCGGCCACCTTCTTGCCGATCTTGAGCAGGTATGATCGCTCAAGTGTCTTGAAGCCGAAG 556069 Query 78594 TAGTTGTATGAAAAGTCTC 78612 || | ||| ||||||| Sbjct 556068 TATTGGTAGTTGAAGTCTC 556050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667662479840