Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq46 129 1e-24 seq48 113 1e-19 >seq46 Length=1539107 Score = 129 bits (142), Expect = 1e-24 Identities = 154/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||||||||| ||||||||||| || | | ||| | ||||| || | Sbjct 988792 CAAG-TGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGAGTACGACCATCCTCAA 988850 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| || | |||||||| | | ||| || ||||| || |||| Sbjct 988851 GCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGAA 988910 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| || ||| || || ||||| || || |||| Sbjct 988911 TCTTACTCTTGACATTGTCGATGGTGTCAGATGACTCGACCTCGAGAGTGATGGTCTTGC 988970 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||||||||| ||||||| ||||| Sbjct 988971 CAGTGAGAGTCTTGACGAAGATTTGCAT 988998 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| ||| || || ||||||||||| | | |||| || ||||| | Sbjct 988564 CAAG-TGCAGAGTGCTCTCCTTCTGAATGTTGTAATCTGAGAGCGTTCGTCCGTCTTCCA 988622 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || ||||||||||| | | ||| ||||| | | ||| || ||||| || || | Sbjct 988623 ATTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 988682 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | || | | ||||||| || ||||| | || |||||||||| Sbjct 988683 TCTTGCTCTTCACATTGTCGATGGTGTCTGACGATTCCACTTCCAACGTGATAGTTTTGC 988742 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||||||||| ||||||| |||||| Sbjct 988743 CTGTGAGAGTCTTGACGAAGATCTGCAT 988770 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| ||||| || || || || ||||||||||| ||| || || | Sbjct 989008 GAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCG 989067 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || || || ||||| || | |||||||| | | || ||||| Sbjct 989068 ACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGAGGAATGCCTTC 989127 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || ||||| | || | | |||| || ||| || ||||| || Sbjct 989128 CTTGTCCTGAATCTTGCTCTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCAAGGGT 989187 Query 152066 AATAGTTTTGCCCGT 152080 || || ||||| || Sbjct 989188 GATGGTCTTGCCGGT 989202 >seq48 Length=500340 Score = 113 bits (124), Expect = 1e-19 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || |||||||| || || | || ||| | |||||||| || || ||||||||||| Sbjct 102272 TTCTGGATGTTATAGTCTGATAGAGTGCGGCCATCTTCCAGTTGCTTGCCGGCGAAGATC 102331 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 || | |||||||| | | ||| |||||||| ||||| || || |||||| | || Sbjct 102332 AGGCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGCTCTTGACATTGTCA 102391 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | | |||||||| ||| || || || || || || ||||||||||| ||||| |||||| Sbjct 102392 ATGGTGTCTGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 102451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818863383901