Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq46 167 5e-36 seq48 141 2e-28 seq23 87.8 4e-12 >seq46 Length=1539107 Score = 167 bits (184), Expect = 5e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || |||| || | ||||| || || || |||||||| || | Sbjct 988543 ACCACCACGCAGGCGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAATCTGA 988602 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| || || || || | ||| || ||||| |||||||| || ||||||||| || Sbjct 988603 GAGCGTTCGTCCGTCTTCCAATTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTGG 988662 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||||||||||| |||||| ||||| || || | ||||| ||||| || | ||| | Sbjct 988663 GATACCCTCCTTGTCCTGGATC-TTGCTCTTCACATTGTCGATGGTGTCTGACGATTCCA 988721 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| | ||||| || || || || | |||||| ||||| |||||||| Sbjct 988722 CTTCCAACGTGATAGTTTTGCCTGTGAGAGTCTTGACGAAGATCTGCAT 988770 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || |||| |||| || ||||| |||||||||||||||| Sbjct 988771 ACCGCCACGAAGACGCAGCACCAAGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTCAGA 988830 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| || || || ||||| ||||||| ||||| ||||| || Sbjct 988831 CAGAGTACGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGG 988890 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| || || | ||||| ||||| || | ||||| Sbjct 988891 GATGCCCTCCTTGTCCTGAATCTTACTCTTGACATTGTCGATGGTGTCAGATGACTCGAC 988950 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| ||||| || || | |||||| ||||| || ||||| Sbjct 988951 CTCGAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 988998 Score = 127 bits (140), Expect = 4e-24 Identities = 155/206 (75%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC-AG 282930 ||| ||||| || || || || || || | ||| ||| || |||||||||||||| Sbjct 988999 ACCGCCACGGAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGCT 989058 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| ||||| ||||| || || || || || |||||||| | |||||| |||||| | Sbjct 989059 CAAG-GTGCGACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGAG 989117 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 |||| || |||||||| || ||| ||||| || ||| | || || |||||||| | ||| Sbjct 989118 GAATGCCTTCCTTGTCCTGAATC-TTGCTCTTGACGTTGTCAATGGTGTCCGAGGACTCG 989176 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGT 283075 || || || ||||| ||||| || || Sbjct 989177 ACCTCAAGGGTGATGGTCTTGCCGGT 989202 >seq48 Length=500340 Score = 141 bits (156), Expect = 2e-28 Identities = 145/187 (78%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 282905 GCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGC 282964 |||| | || |||||||| ||||| | || ||||||||||| || ||||| || ||||| Sbjct 102265 GCTTACCTTCTGGATGTTATAGTCTGATAGAGTGCGGCCATCTTCCAGTTGCTTGCCGGC 102324 Query 282965 AAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTA 283023 ||||||| ||||| |||||| || || || ||||||||||||||| ||||| || | Sbjct 102325 GAAGATCAGGCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATC-TTGCTCTTGA 102383 Query 283024 CGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCT 283083 | | || || ||||| |||| || || ||||| ||||| ||||| ||||| | |||| Sbjct 102384 CATTGTCAATGGTGTCTGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCT 102443 Query 283084 TAACGAA 283090 | ||||| Sbjct 102444 TGACGAA 102450 >seq23 Length=959784 Score = 87.8 bits (96), Expect = 4e-12 Identities = 194/286 (68%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 274431 ACGATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAAACAA 274490 || || ||||| || |||| |||||| | ||||| |||||| ||||| Sbjct 340031 ACAATCGGCGTAATGAATTCGACCAGGAACTCCGGAATGCGAAGCAGAGATGGGAATTGG 339972 Query 274491 CTATGGAAAAAGTTCATGACAAGACCTGATATGTGAGTTCCGTCAACGTCGGCATCTGTC 274550 | |||| ||| || |||| || ||| || ||| | || ||| || ||| ||| Sbjct 339971 CACTGGAGAAAATTGATGAGGAGTCCTTTGATATGACTACCATCATGATCCTGATCCGTC 339912 Query 274551 ATGATCATAACATGTCCATACCGAAGCGAGGAAGTATCTTTATACAACTTCCCTGT-TTG 274609 |||||||||| || |||||||| || || ||||| | ||| | ||| | ||| ||| Sbjct 339911 ATGATCATAAGGTGGCCATACCGCAGGGACCGCGTATCCTCATAGACCTT-CTTGTGTTG 339853 Query 274610 AAG-CCCAAGAATTTGCTTGAGAGCGGTGATTTCTTCGTTCTTTGTGATACTCGCCACAG 274668 ||| |||||||| | ||||| ||| |||| || | ||||| | ||| | || | Sbjct 339852 AAGACCCAAGAA-TGACTTGATAGCATTGATCTCAGCATTCTTCGAGATCTGATCAACGG 339794 Query 274669 AAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCC 274714 ||| || |||||||| || | ||| || || || ||||| || || Sbjct 339793 TAGCGTCGCGTACGTTAAGAATCTTTCCTCGAAGCGGGAACACACC 339748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737443113674