Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20attae_20[genbank_20GCA_5F001299255.1_202015-09-25] 131 sequences; 30,363,635 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq46 140 2e-28 seq48 96.9 2e-15 >seq46 Length=1539107 Score = 140 bits (154), Expect = 2e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| || ||||||||||| || ||||||||||| | ||| || |||| || Sbjct 988561 CACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAATCTGAGAGCGTTCGTCCGTCTTC 988620 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| ||||| |||||||| ||||| || || | || | ||| ||||| ||| Sbjct 988621 CAATTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTGGGATACCCTCCTTGTCCTG 988680 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | |||||||| | |||||||| |||| ||| || || || Sbjct 988681 GATCTTGCTCTTCACATTGTCGATGGTGTCTGACGATTCCACTTCCAACGTGATAGTTTT 988740 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||| ||||| Sbjct 988741 GCCTGTGAGAGTCTTGACGAAGATCTGCAT 988770 Score = 104 bits (114), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | || ||||| ||| || || ||| || ||||||||||| || Sbjct 988768 CATACCGCCACGAAGACGCAGCACCAAGTGTAGAGTAGACTCTTTCTGGATGTTGTAGTC 988827 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || | || || |||||||| ||||| ||||||| || ||||| || | Sbjct 988828 AGACAGAGTACGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGG 988887 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 || | || ||||| ||| ||||| ||| || ||| | |||||||| | || Sbjct 988888 TGGGATGCCCTCCTTGTCCTGAATCTTACTCTTGACATTGT--CGATGGTGTCAGATGAC 988945 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | || || ||||| || ||||| ||||| |||||||||||||| Sbjct 988946 TCGACCTCGAGAGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 988998 Score = 89.7 bits (98), Expect = 4e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG-GCGAGTTGGCGCTCGTCGTC 44187 || |||||||| ||| ||||| ||||||||||| ||| | || | ||| | || || Sbjct 989018 ACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGCTCAAGGT-GCGACCATCTTC 989076 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || |||||||| | ||| ||||| || | ||| | |||||||| ||| Sbjct 989077 GAGCTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTG 989136 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | |||||||| | ||| || ||||| | || || ||||| Sbjct 989137 AATCTTGCTCTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTT 989196 Query 44308 TCCCGT 44313 || || Sbjct 989197 GCCGGT 989202 >seq48 Length=500340 Score = 96.9 bits (106), Expect = 2e-15 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| |||||||| || || | || ||| | || ||||| ||||| ||||| |||| Sbjct 102270 CCTTCTGGATGTTATAGTCTGATAGAGTGCGGCCATCTTCCAGTTGCTTGCCGGCGAAGA 102329 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| || ||||| || | || | |||||||| || ||||| ||| || ||| Sbjct 102330 TCAGGCGTTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGCTCTTGACATTGT 102389 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | || |||||||| | || || ||||| |||||||||||||| || Sbjct 102390 --CAATGGTGTCTGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 102447 Query 44326 GAAG 44329 |||| Sbjct 102448 GAAG 102451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989825252827