Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq8 196 6e-45
seq1 98.7 1e-15
>seq8
Length=1658097
Score = 196 bits (216), Expect = 6e-45
Identities = 394/575 (69%), Gaps = 26/575 (5%)
Strand=Plus/Minus
Query 54104 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTC 54163
|||||| | |||| ||||| | | | |||| |||||||| |||||||| ||||
Sbjct 1350622 TTCTTTCTCAGATTCAGGAAATCGAAGACGTCAGCGTGCCACGGCTCCAAGTAGATGGCG 1350563
Query 54164 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 54223
| | | || || || ||||| || ||||| || | ||| | || ||||| || ||||
Sbjct 1350562 AAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTGAAAACA 1350503
Query 54224 CTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG 54283
| |||||| ||||| | ||||| |||| |||||||| || | |||||| ||| |
Sbjct 1350502 CGCAACATGGGAATGAGTCCATTTGATGTCCCATTGGTTCCTGCAATATAGGAGCCAGTT 1350443
Query 54284 GCACGAAT--ATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGC 54341
|||||||| | | ||||| |||| || || || || | || ||||| | || |
Sbjct 1350442 GCACGAATGCAGTGAGCATTGA--GACCGATGCCACCAGCGGTCTTGGAGATCATGGCAC 1350385
Query 54342 ATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG----TTAAGTAGA 54397
| || | ||| || ||||||||||| || ||||||||| ||||| | ||| ||
Sbjct 1350384 AGGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGC 1350325
Query 54398 AA----ACAGCTAGACATT-TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452
|| |||||| || || |||| ||||| ||||| || | || || || |
Sbjct 1350324 AAGAGGACAGCT-GAGGTTGTGGT--------GTTCCGGCATTGAAGAGCGTGGGTGATG 1350274
Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC-C 54511
| || || || || || | || | || ||||| ||||| || || || |||||
Sbjct 1350273 CATGAGTGAAGCACTTCTGGGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCAT 1350214
Query 54512 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 54571
|| | || || || || || |||||||| | ||||||||| |||| ||| ||| ||||
Sbjct 1350213 CACCG-TGGATGCCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGA-CTTG 1350156
Query 54572 -TTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 54630
||| |||||||||| ||| ||||| || || || || || ||||| || | |||
Sbjct 1350155 CTTGCCGATTTTCAGCAGGTATGATTTCTCTAACGTCTTGAAGCCAAAGTATTGGTAGTT 1350096
Query 54631 AAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTT 54665
||||||| || || | ||| | ||||| ||||
Sbjct 1350095 GAAGTCTCTGTCATAGACAATGGCCGAGTTCAGTT 1350061
>seq1
Length=4142182
Score = 98.7 bits (108), Expect = 1e-15
Identities = 214/320 (67%), Gaps = 3/320 (1%)
Strand=Plus/Minus
Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194
||||| |||||| ||| | |||||| || | | || | ||| || ||||| |||||
Sbjct 2622337 CATGCAAAATCGGTGTGCATACCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGA 2622278
Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254
|| ||||| || || | || ||||| || || || ||||||||||| || |||||
Sbjct 2622277 CCTGGCATCAGACCCTTGCTCTTGAGCCAGAAGATTGAAGCAAATGATCCGGAGAAGAAG 2622218
Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGCTGTCATGT 24311
|| || || || || || || |||| |||| || | || || | | |||
Sbjct 2622217 ATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAG 2622158
Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371
||||| | ||||||| ||||||||||| || || || || || || |||||||
Sbjct 2622157 ATCCATCTAAGAGCCCAGTCGGCCTTCTTCCGTATGCAGGGGATGGTGTCGATAGCATCG 2622098
Query 24372 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 24431
|| || || | || || || ||| || || ||||| || || | || |||||
Sbjct 2622097 AACAGGTATGTCTTCTCTTTGGGATCCTTCACGTATGTGTCGATGAGGAGTGAGTACATC 2622038
Query 24432 TCCGAATGAATGTTTTCAAT 24451
|| || || || || || ||
Sbjct 2622037 TCAGAGTGGATATTCTCCAT 2622018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721488677200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |