Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq2 141 8e-29
>seq2
Length=3515922
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || || ||||||| |||||| ||| |||||| |||||||| ||||| | |
Sbjct 2794010 CCGCCACGGAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 2794069
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| || | ||||| ||||| ||||| || | || |||||||||||||| ||
Sbjct 2794070 AGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGG 2794129
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| ||||||| ||| || | | | | || || | ||| |
Sbjct 2794130 ATGCCCTCCTTGTCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGACT 2794189
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| ||||| |||||||| || || || |||||||| |||||||||
Sbjct 2794190 TCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCATT 2794237
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| ||||| || | ||| |||| ||||| || |||||||| || ||||| || ||
Sbjct 2794692 TTCCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGC 2794751
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| ||| || | ||||| |||||||| || || | || || | |||||| || |
Sbjct 2794752 TCAAGGTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAG 2794811
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | |||||||||||| |||||| || || | | ||| || || | | |||
Sbjct 2794812 GAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAA 2794871
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||||||||| || || ||||| || || |||||
Sbjct 2794872 CCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || || || | ||| || | ||| | ||| || || || || ||||| ||||| |
Sbjct 2794464 TTCCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGG 2794523
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
||||| || |||| || || || || || ||| | || || | ||||| ||| ||
Sbjct 2794524 AGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGG 2794583
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | |||||||||||| ||||| || || | | ||| ||||| | | |||
Sbjct 2794584 GGATGCCTTCCTTGTCTTGAATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCAA 2794643
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|| | |||||||||||||| || | || || ||||| |||||||||
Sbjct 2794644 CCTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCATT 2794693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422259122805740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |