Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2 134 1e-26 seq1 118 1e-21 seq5 111 2e-19 >seq2 Length=3515922 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| ||||| || || ||||| || ||||| | || |||||| | | Sbjct 2794465 AATGCAGATCTTCGTCAAAACTCTGACCGGCAAGACGATCACACTAGAGGTCGAATCTTC 2794406 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 || | | || |||| ||||| || || | ||||| ||||||||||| |||||| Sbjct 2794405 AGATACGATTGACAACG-TCAAGTCGAAGATCCAAGACAAGGAGGGCATCCCACCGGACC 2794347 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||||||| | |||| ||| ||||| ||||| || |||| || || ||| ||||||| Sbjct 2794346 AGCAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCTCAGACTACA 2794287 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| |||||||| |||| || ||||| || Sbjct 2794286 ACATTCAGAAGGAATCCACTCTCCATCTCGT 2794256 Score = 122 bits (134), Expect = 9e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || || || || || ||||| ||||| || | || || || | | Sbjct 2794693 AATGCAAATTTTTGTGAAGACTCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCGAG 2794634 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||| | | | | |||| ||||| || |||| ||||| || ||||||||| |||| | Sbjct 2794633 CGATACCATCGACAACG-TCAAGAGCAAGATTCAAGACAAGGAAGGCATCCCCCCGGATC 2794575 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||||| || |||| || || || || || || |||| ||||||||| |||||||| Sbjct 2794574 AGCAACGTCTGATCTTTGCCGGAAAGCAACTTGAAGACGGCCGCACCCTCTCCGACTACA 2794515 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||| || | || || ||||| || Sbjct 2794514 ACATCCAGAAAGAATCGACTCTCCATCTCGT 2794484 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| |||| || || | | | Sbjct 2794920 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGAGC 2794861 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| || ||||| || | || ||| Sbjct 2794860 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 2794801 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| || |||||||| || || | |||||| | | ||| |||||| Sbjct 2794800 CAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATTACAAC 2794741 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || |||| Sbjct 2794740 ATCCAGAAGGAGTCGACCTTGCA 2794718 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || || || | |||||||| || || || | || ||||| | | Sbjct 2794237 AATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTC 2794178 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||| ||| || | ||||| ||||||||||| | ||||| Sbjct 2794177 AGACACCATTGACAATGTCAAATCAAAGATCCAAGACAAGGAGGGCATCCCACCCGACCA 2794118 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| |||| |||| ||| ||||| ||||| || || | || || || ||||||||| Sbjct 2794117 GCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTACAA 2794058 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||| ||||||||| ||| ||||| | ||| || Sbjct 2794057 CATTCAGAAGGAGAGCACCTTGCATTTGGTGCTG 2794024 >seq1 Length=4142182 Score = 118 bits (130), Expect = 1e-21 Identities = 332/505 (66%), Gaps = 16/505 (3%) Strand=Plus/Plus Query 116870 ATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCG 116929 |||||||| | ||||| || ||||| || |||||||||||| |||||| | | Sbjct 2622018 ATGGAGAATATCCACTCTGAGATGTACTCACTCCTCATCGACACATACGTGAAGGATCCC 2622077 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 | |||||| |||| | || ||||| || || || ||| | |||||||| Sbjct 2622078 AAAGAGAAGACATACCTGTTCGATGCTATCGACACCATCCCCTGCATACGGAAGAAGGCC 2622137 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 || ||||| || | |||||| | | | ||| || | |||| | || ||||| || Sbjct 2622138 GACTGGGCTCTTAGATGGATCTCTGATAAGGAGTCCACTTTCGCTCAACGACTGGTTGCT 2622197 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 ||||| ||||||||||| ||||||| || || || || | || || ||||||||| Sbjct 2622198 TTCGCAGCCGTCGAGGGTATCTTCTTCTCCGGATCATTTGCTTCAATCTTCTGGCTCAAG 2622257 Query 117110 AAACGCGGCCTCATGCCCGGCCTGAC--TTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 | || || ||||| || || || ||||| || || |||||||| | || |||| Sbjct 2622258 AGCAAGGGTCTGATGCCAGGTCTCACCTTTTCA--AATGAACTCATCTCTCGTGATGAGG 2622315 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227 || |||| ||| ||||| || | || | | ||| | ||| | ||| || Sbjct 2622316 GTATGCACACCGATTTTGCATGCCTACTCCTGCAACATCTCAAGCA-----CAAGCCCGA 2622370 Query 117228 C-----GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCAC 117282 | || | | | || || || ||| || ||||| || || | ||||| || Sbjct 2622371 CCAAAAGCTCATTGAGAAGGTCATCGTCGAAGCAGTCGCTATTGAAAAAGAGTTCCTAAC 2622430 Query 117283 CGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCG 117341 || ||||| || || | ||||||| | || | | || | |||| || ||||| | Sbjct 2622431 TGAGGCGCTCCCTGTCGGCTTGCTGGGCATGAACT-CTAAGCTCATGTGCCAGTACATTG 2622489 Query 117342 AGTTCGTCGCCGACAGGCTGCTGCT 117366 |||| ||||||||| | ||||||| Sbjct 2622490 AGTTTGTCGCCGACCGTTTGCTGCT 2622514 Score = 91.5 bits (100), Expect = 2e-13 Identities = 156/223 (70%), Gaps = 5/223 (2%) Strand=Plus/Plus Query 116638 GTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTC 116697 |||| ||||||||| |||||||| || ||||| | ||||| || |||||||| Sbjct 2621731 GTGGAACATGTACAAGCGTGCCGAGGCTAGCTTTTGGACAGCAGAGGAAGTCGACCTGTC 2621790 Query 116698 CAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 ||| ||| | ||| ||| | || ||||| || | || ||| | |||||| || Sbjct 2621791 CAAAGACTTGCACGATTGGCACAACCGACTGAACAACGATGAACGCTACTTCATCTCCCA 2621850 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 ||| || || || ||||| || ||||| || ||||||||||| || | |||||||| Sbjct 2621851 CGTCCTTGCTTTCTTCGCTGCTTCAGACGGTATTGTCAACGAGAACTTGCTGGAGCGTTT 2621910 Query 116815 C-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGG 116856 | || | || ||||| || | || || || || ||||| || Sbjct 2621911 CAGCGC-CGAAGTGCAAGTACCTGAAGCCCGCTGTTTCTATGG 2621952 >seq5 Length=2445035 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| ||||||||| |||| |||||| || | |||| | Sbjct 1847682 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCAGACACAATC 1847741 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | |||| || || | ||||| ||||||||||| | |||||||| ||||| Sbjct 1847742 GACAATGTCAAATCCAAGATCCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCGACTG 1847801 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| || || || |||| || || | | ||||||||| || || ||| Sbjct 1847802 ATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACGTTGAGCGACTACAATATTCAAAAG 1847861 Query 40879 G 40879 | Sbjct 1847862 G 1847862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219103396400