Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2 134 1e-26
seq1 118 1e-21
seq5 111 2e-19
>seq2
Length=3515922
Score = 134 bits (148), Expect = 1e-26
Identities = 158/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || ||||| ||||| || || ||||| || ||||| | || |||||| | |
Sbjct 2794465 AATGCAGATCTTCGTCAAAACTCTGACCGGCAAGACGATCACACTAGAGGTCGAATCTTC 2794406
Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|| | | || |||| ||||| || || | ||||| ||||||||||| ||||||
Sbjct 2794405 AGATACGATTGACAACG-TCAAGTCGAAGATCCAAGACAAGGAGGGCATCCCACCGGACC 2794347
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||||||| | |||| ||| ||||| ||||| || |||| || || ||| |||||||
Sbjct 2794346 AGCAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCTCAGACTACA 2794287
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||| |||||||| |||| || ||||| ||
Sbjct 2794286 ACATTCAGAAGGAATCCACTCTCCATCTCGT 2794256
Score = 122 bits (134), Expect = 9e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || || || || || || ||||| ||||| || | || || || | |
Sbjct 2794693 AATGCAAATTTTTGTGAAGACTCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCGAG 2794634
Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
||| | | | | |||| ||||| || |||| ||||| || ||||||||| |||| |
Sbjct 2794633 CGATACCATCGACAACG-TCAAGAGCAAGATTCAAGACAAGGAAGGCATCCCCCCGGATC 2794575
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
||||||| || |||| || || || || || || |||| ||||||||| ||||||||
Sbjct 2794574 AGCAACGTCTGATCTTTGCCGGAAAGCAACTTGAAGACGGCCGCACCCTCTCCGACTACA 2794515
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||| || | || || ||||| ||
Sbjct 2794514 ACATCCAGAAAGAATCGACTCTCCATCTCGT 2794484
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || ||||| ||||||||| |||| || || | | |
Sbjct 2794920 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGAGC 2794861
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||||| || || | ||||| || ||||| || | || |||
Sbjct 2794860 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 2794801
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| ||| || |||||||| || || | |||||| | | ||| ||||||
Sbjct 2794800 CAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATTACAAC 2794741
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| | || ||||
Sbjct 2794740 ATCCAGAAGGAGTCGACCTTGCA 2794718
Score = 107 bits (118), Expect = 2e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || || || || | |||||||| || || || | || ||||| | |
Sbjct 2794237 AATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTC 2794178
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | | |||| ||| || | ||||| ||||||||||| | |||||
Sbjct 2794177 AGACACCATTGACAATGTCAAATCAAAGATCCAAGACAAGGAGGGCATCCCACCCGACCA 2794118
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| |||| |||| ||| ||||| ||||| || || | || || || |||||||||
Sbjct 2794117 GCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTACAA 2794058
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
||| ||||||||| ||| ||||| | ||| ||
Sbjct 2794057 CATTCAGAAGGAGAGCACCTTGCATTTGGTGCTG 2794024
>seq1
Length=4142182
Score = 118 bits (130), Expect = 1e-21
Identities = 332/505 (66%), Gaps = 16/505 (3%)
Strand=Plus/Plus
Query 116870 ATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCG 116929
|||||||| | ||||| || ||||| || |||||||||||| |||||| | |
Sbjct 2622018 ATGGAGAATATCCACTCTGAGATGTACTCACTCCTCATCGACACATACGTGAAGGATCCC 2622077
Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989
| |||||| |||| | || ||||| || || || ||| | ||||||||
Sbjct 2622078 AAAGAGAAGACATACCTGTTCGATGCTATCGACACCATCCCCTGCATACGGAAGAAGGCC 2622137
Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049
|| ||||| || | |||||| | | | ||| || | |||| | || ||||| ||
Sbjct 2622138 GACTGGGCTCTTAGATGGATCTCTGATAAGGAGTCCACTTTCGCTCAACGACTGGTTGCT 2622197
Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109
||||| ||||||||||| ||||||| || || || || | || || |||||||||
Sbjct 2622198 TTCGCAGCCGTCGAGGGTATCTTCTTCTCCGGATCATTTGCTTCAATCTTCTGGCTCAAG 2622257
Query 117110 AAACGCGGCCTCATGCCCGGCCTGAC--TTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167
| || || ||||| || || || ||||| || || |||||||| | || ||||
Sbjct 2622258 AGCAAGGGTCTGATGCCAGGTCTCACCTTTTCA--AATGAACTCATCTCTCGTGATGAGG 2622315
Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227
|| |||| ||| ||||| || | || | | ||| | ||| | ||| ||
Sbjct 2622316 GTATGCACACCGATTTTGCATGCCTACTCCTGCAACATCTCAAGCA-----CAAGCCCGA 2622370
Query 117228 C-----GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCAC 117282
| || | | | || || || ||| || ||||| || || | ||||| ||
Sbjct 2622371 CCAAAAGCTCATTGAGAAGGTCATCGTCGAAGCAGTCGCTATTGAAAAAGAGTTCCTAAC 2622430
Query 117283 CGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCG 117341
|| ||||| || || | ||||||| | || | | || | |||| || ||||| |
Sbjct 2622431 TGAGGCGCTCCCTGTCGGCTTGCTGGGCATGAACT-CTAAGCTCATGTGCCAGTACATTG 2622489
Query 117342 AGTTCGTCGCCGACAGGCTGCTGCT 117366
|||| ||||||||| | |||||||
Sbjct 2622490 AGTTTGTCGCCGACCGTTTGCTGCT 2622514
Score = 91.5 bits (100), Expect = 2e-13
Identities = 156/223 (70%), Gaps = 5/223 (2%)
Strand=Plus/Plus
Query 116638 GTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTC 116697
|||| ||||||||| |||||||| || ||||| | ||||| || ||||||||
Sbjct 2621731 GTGGAACATGTACAAGCGTGCCGAGGCTAGCTTTTGGACAGCAGAGGAAGTCGACCTGTC 2621790
Query 116698 CAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754
||| ||| | ||| ||| | || ||||| || | || ||| | |||||| ||
Sbjct 2621791 CAAAGACTTGCACGATTGGCACAACCGACTGAACAACGATGAACGCTACTTCATCTCCCA 2621850
Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814
||| || || || ||||| || ||||| || ||||||||||| || | ||||||||
Sbjct 2621851 CGTCCTTGCTTTCTTCGCTGCTTCAGACGGTATTGTCAACGAGAACTTGCTGGAGCGTTT 2621910
Query 116815 C-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGG 116856
| || | || ||||| || | || || || || ||||| ||
Sbjct 2621911 CAGCGC-CGAAGTGCAAGTACCTGAAGCCCGCTGTTTCTATGG 2621952
>seq5
Length=2445035
Score = 111 bits (122), Expect = 2e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || ||||||||||| ||||||||| |||| |||||| || | |||| |
Sbjct 1847682 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCAGACACAATC 1847741
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | |||| || || | ||||| ||||||||||| | |||||||| |||||
Sbjct 1847742 GACAATGTCAAATCCAAGATCCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCGACTG 1847801
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| ||||| || || || |||| || || | | ||||||||| || || |||
Sbjct 1847802 ATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACGTTGAGCGACTACAATATTCAAAAG 1847861
Query 40879 G 40879
|
Sbjct 1847862 G 1847862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219103396400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |