Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq2 145 9e-30
seq5 104 3e-17
>seq2
Length=3515922
Score = 145 bits (160), Expect = 9e-30
Identities = 163/217 (75%), Gaps = 6/217 (3%)
Strand=Plus/Plus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|| |||||||||||| ||||||||||| ||||| ||||| || | ||| || || | ||
Sbjct 2794024 CAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTTCGGCCATC 2794083
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| |||||||| |||||||| || |||| ||||||||||| || | || |||||||||
Sbjct 2794084 CTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTGTC 2794143
Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGAT 43147
||| ||| ||||| | | | ||||| |||| || || || | ||| ||
Sbjct 2794144 TTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTC---TCGACTTCCAGCGTAAT 2794200
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| |||||||| | ||||| |||||||||||||||
Sbjct 2794201 CGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCATT 2794237
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
||| |||| | ||| | ||||| ||||| || |||||| || || ||||||||
Sbjct 2794693 TCCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCT 2794752
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| || || | || || ||||| ||||| ||||| ||||| |||||||| || | ||
Sbjct 2794753 CAAGGTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAGG 2794812
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| || ||||||||| ||| || |||| | | | ||||||||||| || ||
Sbjct 2794813 AATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAAC 2794872
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| |||||||| ||||| || | ||||| || ||||| |||||
Sbjct 2794873 CTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920
>seq5
Length=2445035
Score = 104 bits (114), Expect = 3e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||||||||||||||| || || || || |||| || || ||||| || ||||| |
Sbjct 1847862 CCTTTTGAATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGA 1847803
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| |||||||||||||| | || | || ||||||||| ||| || ||||| |
Sbjct 1847802 TCAGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGT 1847743
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | ||||| ||||| || |||| |||||||| |||||||| || ||||| || |
Sbjct 1847742 CGATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 1847683
Query 43174 AG 43175
||
Sbjct 1847682 AG 1847681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571817492784200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |