Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq2 131 1e-25
seq5 86.0 4e-12
>seq2
Length=3515922
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || |||||||||| || || || || || ||||| |||||||||||||||
Sbjct 2794010 CCGCCACGGAGTCTCAGCACCAAATGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 2794069
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| ||| | || || | ||||||||| ||||| || || | |||||||||| ||
Sbjct 2794070 AGCGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCGGGTGGG 2794129
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| |||||| || | || | | || | || | |||||
Sbjct 2794130 ATGCCCTCCTTGTCTTGGATCTTTGATTTGACATTGTCAATGGTGTCTGAGCTCTCGACT 2794189
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||| || || ||||| || | ||| || |||||||| |||||
Sbjct 2794190 TCCAGCGTAATCGTCTTGCCCGTCAAAGTCTTGACAAAGATTTGCAT 2794236
Score = 127 bits (140), Expect = 1e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| ||||| || || || || || || | ||| ||| ||||| ||||||||||| ||
Sbjct 2794237 TCCACCGCGAAGTCTGAGAACGAGATGGAGAGTGGATTCCTTCTGAATGTTGTAGTCTGA 2794296
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| ||| |||| || | ||||||||| ||||| || | || |||||||| ||
Sbjct 2794297 GAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCCGGTGG 2794356
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| ||||| ||| | | | | |||| ||| | ||||||||
Sbjct 2794357 GATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCAATCGTATCTGAAGATTCGAC 2794416
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| || |||||||| |||||||| || |||||||||||
Sbjct 2794417 CTCTAGTGTGATCGTCTTGCCGGTCAGAGTTTTGACGAAGATCTGCAT 2794464
Score = 105 bits (116), Expect = 4e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | || || || || | ||| ||||||||| ||||||||||||||
Sbjct 2794465 TCCACCACGAAGACGGAGGACGAGATGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGA 2794524
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| ||| |||| || | ||||| || || || || || || ||||| || |||
Sbjct 2794525 GAGGGTGCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGATCCGGGGG 2794584
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || |||||||| ||||| ||| | | | | || | |||| |||| || ||
Sbjct 2794585 GATGCCTTCCTTGTCTTGAATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGACTCAAC 2794644
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| ||||| ||||| || ||||| |||||||| || |||||
Sbjct 2794645 CTCAAGCGTAATGGTCTTGCCAGTAAGAGTCTTCACAAAAATTTGCAT 2794692
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | || |||| ||| || || || ||||| |||||||| |||
Sbjct 2794693 TCCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCT 2794752
Query 34222 CA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280
|| | || ||| | || || | ||| || || ||||| ||||| |||||||| || |
Sbjct 2794753 CAAGGTG-CGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAG 2794811
Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
| | || |||||||| ||||| ||| | || | | || | ||| |||| || |
Sbjct 2794812 GAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAA 2794871
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || | |||||||| |||||||| | ||| || || |||||||||||
Sbjct 2794872 CCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920
>seq5
Length=2445035
Score = 86.0 bits (94), Expect = 4e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
|| || || ||||||||| || | |||| |||| || | |||||||| ||||| ||
Sbjct 1847860 TTTTGAATATTGTAGTCGCTCAACGTACGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATC 1847801
Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321
|| ||||||||||| || | || ||||||||| ||||| || | || | |
Sbjct 1847800 AGTCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTGGATTTGACATTGTCG 1847741
Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381
|| | || | |||||||| || | |||||||| ||||| ||||| || || || |||
Sbjct 1847740 ATTGTGTCTGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 1847681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071940938400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |