Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq8 342 5e-89 seq1 131 1e-25 seq2 111 1e-19 seq5 93.3 4e-14 >seq8 Length=1658097 Score = 342 bits (378), Expect = 5e-89 Identities = 1235/1904 (65%), Gaps = 57/1904 (3%) Strand=Plus/Minus Query 22104 TCTTG-TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162 ||||| || || || ||||| |||| | || || | ||||||| || || |||||| Sbjct 1351939 TCTTGATCGACAGTGAACTGAATGGGTTGTGTAGCGGCCATGGTGCGGAGGTAGTACATG 1351880 Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222 || || || || ||||||||||| || || || || || || | ||| || | Sbjct 1351879 CCGGTTTTGAGGCCCATCTTCCAGCCGGCGAAGTGCATGGATGTGATTTTGCCCATGGTG 1351820 Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282 || | || || | || | || || ||| ||||| || ||||| |||||||| Sbjct 1351819 GGTTCTTTCAAGTGGATGTTTAGAGATTGGGACTGGTCGATGAAGGCTCCCCGATCGGCT 1351760 Query 22283 GCCATATTTATCAATGTACGCATCGAC--ATTTCCCATACGGTCTTGTACAGTTGCCTGA 22340 ||||| | | | || || | | | |||||||| || |||||||||||| | ||| Sbjct 1351759 GCCATCTGGAGGATAGTCCG--TTGGCTGATTTCCCAGACAGTCTTGTACAGTGCCTTGA 1351702 Query 22341 TCTCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTT 22399 | || || || | | || | |||| || || || | | ||||| || Sbjct 1351701 TGTCGGCAGGGAT-GTTGGGAATGTTCTGAACCGAACCACCCTCGGCGATGATACGGTTC 1351643 Query 22400 TTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAG--ATGACGGTTCA 22457 || || | || ||| | ||| | | || || ||| || | || ||| |||| | Sbjct 1351642 TTCATGTTGTCTGACCAGAGACCAAGGTCGACCAGATCCTTCAAGAGCCATG--GGTTGA 1351585 Query 22458 CCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGA 22517 | || || ||||| || | || ||| || || ||| |||||||| || | || |||| Sbjct 1351584 CGACCTGGAACTCACCAGCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCGA 1351525 Query 22518 AAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTA 22577 | |||| ||||| ||||| ||||| | ||| || ||||| ||||| || || | || | Sbjct 1351524 AGCATTCGTTGTTGCCCAGGATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGA 1351465 Query 22578 GCGAGTTTCTCAAGCCGTGCTTTGAAATTTTA-CTCTTGAGCA-TCGACCAGTCCCACAG 22635 | ||||| | | || | || | ||| | || | || | || ||| |||||||| Sbjct 1351464 GAGAGTTGCGAACACCATATTTGGCAATGTCGGCTTTCAAGGAGTC--CCAATCCCACAG 1351407 Query 22636 ATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC----GCGACTCGCCG 22691 ||||| || || ||||| |||||| || || || | | ||| | |||| | Sbjct 1351406 GTCGGATGGGGTGACATT---CCACATGTCATACTGGAGAATGCCTTGTGAGACT----G 1351354 Query 22692 GGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCA 22751 ||||||| ||||| || || || | || | ||||||||||| || | Sbjct 1351353 GGCTGCCCTCGTATGTCTCATATGTGCCTTGCTCTTTTGCAAGTTCGCACGATGCAGTGA 1351294 Query 22752 ACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATT--CG-GCGGC-GGCGACG 22807 || ||| || || ||||| ||||| | |||||| || || || | || || Sbjct 1351293 GAGCCGCGTGGTAGATGGTCTCAAAGATCTGGATGTTCAGTTGTCGAGCCTCTGGAGAG- 1351235 Query 22808 CTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCG 22867 || | |||| ||||| | ||| || || || | ||| || || || | ||| Sbjct 1351234 ---TCAAAGGGCAGACGCAGAGCAAGGAAGGCATCTGCAAGACCTTGGACCCCAAGGCCG 1351178 Query 22868 ATCGGTCGGTTTTTCAGATTCGACACTT--TTGCCTCGGGCAAAGGATACCAATTCGAAT 22925 || ||||| | | || ||| | ||| | ||||| || | || || | || | Sbjct 1351177 ATAGGTCGATGTCGCATATTG--CTCTTCCTGGCCTCAGGAACCGGGTAGTAGTTGATGT 1351120 Query 22926 CGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGT 22985 |||| || ||||||| || | ||| || | | || | | |||| Sbjct 1351119 CGATGATTTTGTTCAAATTGCGGGTGACGACCTGAGTGACCTCATGAAGGCGGCCGAAGT 1351060 Query 22986 CGTAAACGCCC---GATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATA 23042 | || |||| | ||| | ||||| || | || | || || | |||||| | Sbjct 1351059 CATACTCGCCACGGGGTTGGTCGACAAAAGTGGGAAGAGCCAGGGAAGCCAAATTGCAGA 1351000 Query 23043 CGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTT- 23101 | || ||||| || | ||| |||| || || ||||| || ||||| | ||| Sbjct 1350999 CAGCAACCTCATCAGGCGCTGTGAACTCGACGATCTCGGTGCAGAGATT--TGAGCTTCG 1350942 Query 23102 -ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTA 23160 || |||||||| || |||||||||| || | |||||| | |||||||||||||||||| Sbjct 1350941 AATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTATTGCAGGCATCCTTGTAGAGCATGTA 1350882 Query 23161 CGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAAC 23220 || || || ||||| ||| | ||| | ||||| ||||| |||| || | || Sbjct 1350881 GGGAGTCCCAGTCTCAGTCTGAGCCTCAAGAATCGCATACCACAGCTTCTGGGCCTTGAC 1350822 Query 23221 ACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCAC 23279 ||| ||| | | ||| |||| || || | | ||| | | | | || ||| | | Sbjct 1350821 G-GTCTGACGGCCACGGCCCTCTTTTTCATATCTCTCGTAGAGCTCCTGGAACTCGTCGC 1350763 Query 23280 CGTA-ACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTC 23337 | || ||| |||||||| || || | | ||| || || | ||| ||||| || Sbjct 1350762 CATAGACA-TCGGCCAGACCTGGAGCCT-CATGAGGGCAGAAAAGAGTCCACTCCTGGTT 1350705 Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397 || || || || ||| || | || || |||| | ||| |||||||| || ||||| Sbjct 1350704 CTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGC 1350645 Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457 || || || || |||||| ||||||| ||| || || || || || ||||| || || Sbjct 1350644 ACGGACTTCTTCCTTGCCGTGGTTCTTTCTCAGATTCAGGAAATCGAAGACGTCAGCGTG 1350585 Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517 ||||||||| | ||| | ||| || || || |||| ||| ||||||||||| |||||||| Sbjct 1350584 CCACGGCTCCAAGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTA 1350525 Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTAC 23577 ||||||||||||||| | || | | ||| || | ||| || || || | || Sbjct 1350524 GCGGGCCGTGTTGTTGAAAACACGCAACATGGGAATGAGTCCATTTGATGTCCCATTGGT 1350465 Query 23578 GCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCC 23637 || || | | || || |||| |||| | |||| | | || ||| ||||| || | Sbjct 1350464 TCCTGCAATATAGGAGCCAGTTGCACGAATGCAGTGAGCATTGAGACCGATGCCACCAGC 1350405 Query 23638 CGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC 23697 | || || ||||| || || || || ||||||||||||||||||||||| || || Sbjct 1350404 GGTCTTGGAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTATCATC 1350345 Query 23698 TTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAG 23757 || | ||| |||||| || || |||| || | || || || |||| ||| || Sbjct 1350344 CTTCATGTCGATCAAGAAGCAAGAGGACAGCTGAGGTTGTGGTGTTCCGGCATTGAAGAG 1350285 Query 23758 TGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGC 23817 || || || || || ||| | | ||||| || ||||| || || ||||| Sbjct 1350284 CGTGGGTGATGCATGAGTGAAGCACTTCTGGGACATGAGGTTGTATGTCTCAATGGCCTT 1350225 Query 23818 ATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877 ||||| || || ||||| || || | || || ||||| ||||||| || |||| || Sbjct 1350224 CTCAATATCATCACCGTGGATGCCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTC 1350165 Query 23878 GAC--CGTG-ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934 | | | || |||| ||||| | ||| ||||| | | ||| || || ||||| Sbjct 1350164 GGCGACTTGCTTGCCG---ATTTTCAGCAGGTATGATTTCTCTAACGTCTTGAAGCCAAA 1350108 Query 23935 ATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 || | ||||| ||||| | || | || |||||||| |||| Sbjct 1350107 GTATTGGTAGTTGAAGTCTCTGTCATAGACAATGGCCGAGTTCA 1350064 >seq1 Length=4142182 Score = 131 bits (144), Expect = 1e-25 Identities = 323/483 (67%), Gaps = 18/483 (4%) Strand=Plus/Plus Query 57816 CATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAA-ACG 57874 || || || ||||| || || |||||||| || ||||||||||| | | ||||| || Sbjct 2622030 CACTCTGAGATGTACTCACTCCTCATCGACACATACGTGAAGGATCCCAAAGAGAAGACA 2622089 Query 57875 TAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAAT 57934 || |||||| | || ||||| || || ||| || |||||||| || ||| | | Sbjct 2622090 TA-CCTGTTCGATGCTATCGACACCATCCCCTGCATACGGAAGAAGGCCGACTGGGCTCT 2622148 Query 57935 CAAATGGA----TAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCG 57990 | ||||| | | ||| | |||| ||||| | | || | || ||||| | Sbjct 2622149 TAGATGGATCTCTGATAAG----GAGTCCACTTTCGCTCAACGACTGGTTGCTTTCGCAG 2622204 Query 57991 CCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCG 58050 ||||||| ||||| ||||| || || ||||| |||| || ||| | |||| | Sbjct 2622205 CCGTCGAGGGTATCTTCTTCTCCGGATCATTTGCTTCAATCTTCTGGCTCAAGAGCAAGG 2622264 Query 58051 GCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATA 58110 | |||||||| || || || ||| || || | || || || || |||||| | || | Sbjct 2622265 GTCTGATGCCAGGTCTCACCTTTTCAAATGAACTCATCTCTCGTGATGAGGGTATGCACA 2622324 Query 58111 CTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAA----TAAACCGACGCGGGATCGC 58166 | |||||||| |||||| | || ||| | |||| | ||||| | | | | Sbjct 2622325 CCGATTTTGCATGCCTA--CTCCTGCAACA-TCTCAAGCACAAGCCCGAC-CAAAAGCTC 2622380 Query 58167 ATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTA 58226 || | | | ||| ||| || ||||| || ||||| ||||| | || || || || Sbjct 2622381 ATTGAGAAGGTCATCGTCGAAGCAGTCGCTATTGAAAAAGAGTTCCTAACTGAGGCGCTC 2622440 Query 58227 CCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCC 58286 || || | | |||| || |||||| | | | |||| |||||||||||||||| ||| Sbjct 2622441 CCTGTCGGCTTGCTGGGCATGAACTCTAAGCTCATGTGCCAGTACATTGAGTTTGTCGCC 2622500 Query 58287 GAC 58289 ||| Sbjct 2622501 GAC 2622503 >seq2 Length=3515922 Score = 111 bits (122), Expect = 1e-19 Identities = 147/201 (73%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||| |||| ||||| || |||||| |||| ||||| || Sbjct 2794921 CATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGAG 2794862 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGA 31308 ||||| |||| | ||||| ||| || | | ||||||||||||| | || || || Sbjct 2794861 CGACACCATCGACAATGTCAA---GAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGA 2794805 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||| || || ||||| || |||||| | || || || |||||||||| Sbjct 2794804 TCAGCAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATTA 2794745 Query 31369 TAACATTCAAAAAGAATCGAC 31389 ||||| || || || ||||| Sbjct 2794744 CAACATCCAGAAGGAGTCGAC 2794724 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||||| || ||||| || || || | || ||||| || | Sbjct 2794692 ATGCAAATTTTTGTGAAGACTCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCGAGC 2794633 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | ||||| | || |||||||||||| | || || || ||| Sbjct 2794632 GATACCATCGACAACGTCAAGAGCAAGATTCAAGACAAGGAAGGCATCCCCCCGGATCAG 2794573 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || || || || || || | |||||| || | ||| || ||| Sbjct 2794572 CAACGTCTGATCTTTGCCGGAAAGCAACTTGAAGACGGCCGCACCCTCTCCGACTACAAC 2794513 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || |||||||||||||| ||||| || || Sbjct 2794512 ATCCAGAAAGAATCGACTCTCCATCTCGTCCT 2794481 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||| |||| ||||| ||||| || | || || || || Sbjct 2794236 ATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTCA 2794177 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | |||||| || ||| | |||||||| ||| | || |||||||| Sbjct 2794176 GACACCATTGACAATGTCAAATCAAAGA-TCCAAGACAAGGAGGGCATCCCACCCGACCA 2794118 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||||||||| ||| | || || || || ||| || || Sbjct 2794117 GCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTACAA 2794058 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 |||||| || || || | ||| |||| || ||||| | |||||| Sbjct 2794057 CATTCAGAAGGAGAGCACCTTGCATTTGGTGCTGAGACTCCGTGGCGGT 2794009 >seq5 Length=2445035 Score = 93.3 bits (102), Expect = 4e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| || || ||||| || |||||| |||| || ||| | || |||| || Sbjct 1847682 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCAGACACAATC 1847741 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | |||||| | || |||||||| ||| | || || ||||||||||| || Sbjct 1847742 GACAATGTCAAATCCAAGATCCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCGACTG 1847801 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || ||||| ||||| || | |||||| || ||||||| || || |||||||| Sbjct 1847802 ATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACGTTGAGCGACTACAATATTCAAAA 1847860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766316418800