Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq8 342 5e-89
seq1 131 1e-25
seq2 111 1e-19
seq5 93.3 4e-14
>seq8
Length=1658097
Score = 342 bits (378), Expect = 5e-89
Identities = 1235/1904 (65%), Gaps = 57/1904 (3%)
Strand=Plus/Minus
Query 22104 TCTTG-TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162
||||| || || || ||||| |||| | || || | ||||||| || || ||||||
Sbjct 1351939 TCTTGATCGACAGTGAACTGAATGGGTTGTGTAGCGGCCATGGTGCGGAGGTAGTACATG 1351880
Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222
|| || || || ||||||||||| || || || || || || | ||| || |
Sbjct 1351879 CCGGTTTTGAGGCCCATCTTCCAGCCGGCGAAGTGCATGGATGTGATTTTGCCCATGGTG 1351820
Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282
|| | || || | || | || || ||| ||||| || ||||| ||||||||
Sbjct 1351819 GGTTCTTTCAAGTGGATGTTTAGAGATTGGGACTGGTCGATGAAGGCTCCCCGATCGGCT 1351760
Query 22283 GCCATATTTATCAATGTACGCATCGAC--ATTTCCCATACGGTCTTGTACAGTTGCCTGA 22340
||||| | | | || || | | | |||||||| || |||||||||||| | |||
Sbjct 1351759 GCCATCTGGAGGATAGTCCG--TTGGCTGATTTCCCAGACAGTCTTGTACAGTGCCTTGA 1351702
Query 22341 TCTCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTT 22399
| || || || | | || | |||| || || || | | ||||| ||
Sbjct 1351701 TGTCGGCAGGGAT-GTTGGGAATGTTCTGAACCGAACCACCCTCGGCGATGATACGGTTC 1351643
Query 22400 TTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAG--ATGACGGTTCA 22457
|| || | || ||| | ||| | | || || ||| || | || ||| |||| |
Sbjct 1351642 TTCATGTTGTCTGACCAGAGACCAAGGTCGACCAGATCCTTCAAGAGCCATG--GGTTGA 1351585
Query 22458 CCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGA 22517
| || || ||||| || | || ||| || || ||| |||||||| || | || ||||
Sbjct 1351584 CGACCTGGAACTCACCAGCCAGGACACGACGGGAGTAGATGTTGGAAGTATATGGCTCGA 1351525
Query 22518 AAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTA 22577
| |||| ||||| ||||| ||||| | ||| || ||||| ||||| || || | || |
Sbjct 1351524 AGCATTCGTTGTTGCCCAGGATCTGGGAGGTTGACGCGGTAGGCATAGGAGCAACGAGGA 1351465
Query 22578 GCGAGTTTCTCAAGCCGTGCTTTGAAATTTTA-CTCTTGAGCA-TCGACCAGTCCCACAG 22635
| ||||| | | || | || | ||| | || | || | || ||| ||||||||
Sbjct 1351464 GAGAGTTGCGAACACCATATTTGGCAATGTCGGCTTTCAAGGAGTC--CCAATCCCACAG 1351407
Query 22636 ATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC----GCGACTCGCCG 22691
||||| || || ||||| |||||| || || || | | ||| | |||| |
Sbjct 1351406 GTCGGATGGGGTGACATT---CCACATGTCATACTGGAGAATGCCTTGTGAGACT----G 1351354
Query 22692 GGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCA 22751
||||||| ||||| || || || | || | ||||||||||| || |
Sbjct 1351353 GGCTGCCCTCGTATGTCTCATATGTGCCTTGCTCTTTTGCAAGTTCGCACGATGCAGTGA 1351294
Query 22752 ACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATT--CG-GCGGC-GGCGACG 22807
|| ||| || || ||||| ||||| | |||||| || || || | || ||
Sbjct 1351293 GAGCCGCGTGGTAGATGGTCTCAAAGATCTGGATGTTCAGTTGTCGAGCCTCTGGAGAG- 1351235
Query 22808 CTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCG 22867
|| | |||| ||||| | ||| || || || | ||| || || || | |||
Sbjct 1351234 ---TCAAAGGGCAGACGCAGAGCAAGGAAGGCATCTGCAAGACCTTGGACCCCAAGGCCG 1351178
Query 22868 ATCGGTCGGTTTTTCAGATTCGACACTT--TTGCCTCGGGCAAAGGATACCAATTCGAAT 22925
|| ||||| | | || ||| | ||| | ||||| || | || || | || |
Sbjct 1351177 ATAGGTCGATGTCGCATATTG--CTCTTCCTGGCCTCAGGAACCGGGTAGTAGTTGATGT 1351120
Query 22926 CGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGT 22985
|||| || ||||||| || | ||| || | | || | | ||||
Sbjct 1351119 CGATGATTTTGTTCAAATTGCGGGTGACGACCTGAGTGACCTCATGAAGGCGGCCGAAGT 1351060
Query 22986 CGTAAACGCCC---GATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATA 23042
| || |||| | ||| | ||||| || | || | || || | |||||| |
Sbjct 1351059 CATACTCGCCACGGGGTTGGTCGACAAAAGTGGGAAGAGCCAGGGAAGCCAAATTGCAGA 1351000
Query 23043 CGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTT- 23101
| || ||||| || | ||| |||| || || ||||| || ||||| | |||
Sbjct 1350999 CAGCAACCTCATCAGGCGCTGTGAACTCGACGATCTCGGTGCAGAGATT--TGAGCTTCG 1350942
Query 23102 -ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTA 23160
|| |||||||| || |||||||||| || | |||||| | ||||||||||||||||||
Sbjct 1350941 AATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTATTGCAGGCATCCTTGTAGAGCATGTA 1350882
Query 23161 CGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAAC 23220
|| || || ||||| ||| | ||| | ||||| ||||| |||| || | ||
Sbjct 1350881 GGGAGTCCCAGTCTCAGTCTGAGCCTCAAGAATCGCATACCACAGCTTCTGGGCCTTGAC 1350822
Query 23221 ACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCAC 23279
||| ||| | | ||| |||| || || | | ||| | | | | || ||| | |
Sbjct 1350821 G-GTCTGACGGCCACGGCCCTCTTTTTCATATCTCTCGTAGAGCTCCTGGAACTCGTCGC 1350763
Query 23280 CGTA-ACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTC 23337
| || ||| |||||||| || || | | ||| || || | ||| ||||| ||
Sbjct 1350762 CATAGACA-TCGGCCAGACCTGGAGCCT-CATGAGGGCAGAAAAGAGTCCACTCCTGGTT 1350705
Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397
|| || || || ||| || | || || |||| | ||| |||||||| || |||||
Sbjct 1350704 CTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCACATAGCATAGAACAGGTCACGGGC 1350645
Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457
|| || || || |||||| ||||||| ||| || || || || || ||||| || ||
Sbjct 1350644 ACGGACTTCTTCCTTGCCGTGGTTCTTTCTCAGATTCAGGAAATCGAAGACGTCAGCGTG 1350585
Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517
||||||||| | ||| | ||| || || || |||| ||| ||||||||||| ||||||||
Sbjct 1350584 CCACGGCTCCAAGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTA 1350525
Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTAC 23577
||||||||||||||| | || | | ||| || | ||| || || || | ||
Sbjct 1350524 GCGGGCCGTGTTGTTGAAAACACGCAACATGGGAATGAGTCCATTTGATGTCCCATTGGT 1350465
Query 23578 GCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCC 23637
|| || | | || || |||| |||| | |||| | | || ||| ||||| || |
Sbjct 1350464 TCCTGCAATATAGGAGCCAGTTGCACGAATGCAGTGAGCATTGAGACCGATGCCACCAGC 1350405
Query 23638 CGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC 23697
| || || ||||| || || || || ||||||||||||||||||||||| || ||
Sbjct 1350404 GGTCTTGGAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTATCATC 1350345
Query 23698 TTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAG 23757
|| | ||| |||||| || || |||| || | || || || |||| ||| ||
Sbjct 1350344 CTTCATGTCGATCAAGAAGCAAGAGGACAGCTGAGGTTGTGGTGTTCCGGCATTGAAGAG 1350285
Query 23758 TGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGC 23817
|| || || || || ||| | | ||||| || ||||| || || |||||
Sbjct 1350284 CGTGGGTGATGCATGAGTGAAGCACTTCTGGGACATGAGGTTGTATGTCTCAATGGCCTT 1350225
Query 23818 ATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877
||||| || || ||||| || || | || || ||||| ||||||| || |||| ||
Sbjct 1350224 CTCAATATCATCACCGTGGATGCCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTC 1350165
Query 23878 GAC--CGTG-ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934
| | | || |||| ||||| | ||| ||||| | | ||| || || |||||
Sbjct 1350164 GGCGACTTGCTTGCCG---ATTTTCAGCAGGTATGATTTCTCTAACGTCTTGAAGCCAAA 1350108
Query 23935 ATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978
|| | ||||| ||||| | || | || |||||||| ||||
Sbjct 1350107 GTATTGGTAGTTGAAGTCTCTGTCATAGACAATGGCCGAGTTCA 1350064
>seq1
Length=4142182
Score = 131 bits (144), Expect = 1e-25
Identities = 323/483 (67%), Gaps = 18/483 (4%)
Strand=Plus/Plus
Query 57816 CATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAA-ACG 57874
|| || || ||||| || || |||||||| || ||||||||||| | | ||||| ||
Sbjct 2622030 CACTCTGAGATGTACTCACTCCTCATCGACACATACGTGAAGGATCCCAAAGAGAAGACA 2622089
Query 57875 TAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAAT 57934
|| |||||| | || ||||| || || ||| || |||||||| || ||| | |
Sbjct 2622090 TA-CCTGTTCGATGCTATCGACACCATCCCCTGCATACGGAAGAAGGCCGACTGGGCTCT 2622148
Query 57935 CAAATGGA----TAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCG 57990
| ||||| | | ||| | |||| ||||| | | || | || ||||| |
Sbjct 2622149 TAGATGGATCTCTGATAAG----GAGTCCACTTTCGCTCAACGACTGGTTGCTTTCGCAG 2622204
Query 57991 CCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCG 58050
||||||| ||||| ||||| || || ||||| |||| || ||| | |||| |
Sbjct 2622205 CCGTCGAGGGTATCTTCTTCTCCGGATCATTTGCTTCAATCTTCTGGCTCAAGAGCAAGG 2622264
Query 58051 GCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATA 58110
| |||||||| || || || ||| || || | || || || || |||||| | || |
Sbjct 2622265 GTCTGATGCCAGGTCTCACCTTTTCAAATGAACTCATCTCTCGTGATGAGGGTATGCACA 2622324
Query 58111 CTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAA----TAAACCGACGCGGGATCGC 58166
| |||||||| |||||| | || ||| | |||| | ||||| | | | |
Sbjct 2622325 CCGATTTTGCATGCCTA--CTCCTGCAACA-TCTCAAGCACAAGCCCGAC-CAAAAGCTC 2622380
Query 58167 ATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTA 58226
|| | | | ||| ||| || ||||| || ||||| ||||| | || || || ||
Sbjct 2622381 ATTGAGAAGGTCATCGTCGAAGCAGTCGCTATTGAAAAAGAGTTCCTAACTGAGGCGCTC 2622440
Query 58227 CCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCC 58286
|| || | | |||| || |||||| | | | |||| |||||||||||||||| |||
Sbjct 2622441 CCTGTCGGCTTGCTGGGCATGAACTCTAAGCTCATGTGCCAGTACATTGAGTTTGTCGCC 2622500
Query 58287 GAC 58289
|||
Sbjct 2622501 GAC 2622503
>seq2
Length=3515922
Score = 111 bits (122), Expect = 1e-19
Identities = 147/201 (73%), Gaps = 6/201 (3%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| |||||| |||| ||||| || |||||| |||| ||||| ||
Sbjct 2794921 CATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGAG 2794862
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGA 31308
||||| |||| | ||||| ||| || | | ||||||||||||| | || || ||
Sbjct 2794861 CGACACCATCGACAATGTCAA---GAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGA 2794805
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
|||||||| || || ||||| || |||||| | || || || ||||||||||
Sbjct 2794804 TCAGCAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATTA 2794745
Query 31369 TAACATTCAAAAAGAATCGAC 31389
||||| || || || |||||
Sbjct 2794744 CAACATCCAGAAGGAGTCGAC 2794724
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || |||||||| || ||||| || || || | || ||||| || |
Sbjct 2794692 ATGCAAATTTTTGTGAAGACTCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCGAGC 2794633
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | ||||| | || |||||||||||| | || || || |||
Sbjct 2794632 GATACCATCGACAACGTCAAGAGCAAGATTCAAGACAAGGAAGGCATCCCCCCGGATCAG 2794573
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || || || || || || | |||||| || | ||| || |||
Sbjct 2794572 CAACGTCTGATCTTTGCCGGAAAGCAACTTGAAGACGGCCGCACCCTCTCCGACTACAAC 2794513
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || |||||||||||||| ||||| || ||
Sbjct 2794512 ATCCAGAAAGAATCGACTCTCCATCTCGTCCT 2794481
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || |||||| |||| ||||| ||||| || | || || || ||
Sbjct 2794236 ATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTCA 2794177
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | |||||| || ||| | |||||||| ||| | || ||||||||
Sbjct 2794176 GACACCATTGACAATGTCAAATCAAAGA-TCCAAGACAAGGAGGGCATCCCACCCGACCA 2794118
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || ||||||||||| ||| | || || || || ||| || ||
Sbjct 2794117 GCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTACAA 2794058
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|||||| || || || | ||| |||| || ||||| | ||||||
Sbjct 2794057 CATTCAGAAGGAGAGCACCTTGCATTTGGTGCTGAGACTCCGTGGCGGT 2794009
>seq5
Length=2445035
Score = 93.3 bits (102), Expect = 4e-14
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| ||||| || || ||||| || |||||| |||| || ||| | || |||| ||
Sbjct 1847682 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCAGACACAATC 1847741
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | |||||| | || |||||||| ||| | || || ||||||||||| ||
Sbjct 1847742 GACAATGTCAAATCCAAGATCCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCGACTG 1847801
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| ||||| ||||| || | |||||| || ||||||| || || ||||||||
Sbjct 1847802 ATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACGTTGAGCGACTACAATATTCAAAA 1847860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766316418800
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