Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq8 196 6e-45
seq1 102 1e-16
>seq8
Length=1658097
Score = 196 bits (216), Expect = 6e-45
Identities = 384/563 (68%), Gaps = 6/563 (1%)
Strand=Plus/Minus
Query 63342 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63401
|||||| | |||| ||||| | | | |||| |||||||| |||||||| |||||
Sbjct 1350622 TTCTTTCTCAGATTCAGGAAATCGAAGACGTCAGCGTGCCACGGCTCCAAGTAGATGGCG 1350563
Query 63402 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63461
| | | || || || ||||| || ||||| || | ||| | || ||||| || ||||
Sbjct 1350562 AAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTGAAAACA 1350503
Query 63462 CTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTG 63521
| |||||| ||||| | || |||||| | |||||||| || | |||||| ||| |
Sbjct 1350502 CGCAACATGGGAATGAGTCCATTTGATGTCCCATTGGTTCCTGCAATATAGGAGCCAGTT 1350443
Query 63522 GCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 63579
|||||||| | | ||||| |||| || || || || | || ||||| | || |
Sbjct 1350442 GCACGAATGCAGTGAGCATTGA--GACCGATGCCACCAGCGGTCTTGGAGATCATGGCAC 1350385
Query 63580 ATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAAC 63639
| || | |||||| |||||||| || ||||||||||| |||||| | | || |
Sbjct 1350384 AGGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGC 1350325
Query 63640 AGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 63699
| |||| || | | | ||||| ||||| || | || || || || || || |
Sbjct 1350324 AAGAGGACAGCTGAGGTTGTGGTGTTCCGGCATTGAAGAGCGTGGGTGATGCATGAGTGA 1350265
Query 63700 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGA 63758
| || || | || | || ||||| |||||||| || || ||||| || | ||
Sbjct 1350264 AGCACTTCTGGGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCATCACCG-TGG 1350206
Query 63759 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATT 63818
|| || || || |||||||| | ||||||||| |||| ||| | | || ||| |||
Sbjct 1350205 ATGCCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGACTTGCTTGCCGATT 1350146
Query 63819 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 63878
|||| || ||| ||||| || || || || || ||||| || | ||| |||||||
Sbjct 1350145 TTCAGCAGGTATGATTTCTCTAACGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCTG 1350086
Query 63879 TCGTAAATAATAACCGAATTGAG 63901
|| || | ||| |||| || ||
Sbjct 1350085 TCATAGACAATGGCCGAGTTCAG 1350063
>seq1
Length=4142182
Score = 102 bits (112), Expect = 1e-16
Identities = 215/320 (67%), Gaps = 3/320 (1%)
Strand=Plus/Minus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
||||| |||||| ||||| |||||| || | | || | ||| || ||||| |||||
Sbjct 2622337 CATGCAAAATCGGTGTGCATACCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGA 2622278
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|| ||||| || || | || ||||| || || ||||| ||||||||||| ||||||
Sbjct 2622277 CCTGGCATCAGACCCTTGCTCTTGAGCCAGAAGATTGAAGCAAATGATCCGGAGAAGAAG 2622218
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33758
|| || || || || || || |||| |||| | | || || | | |||
Sbjct 2622217 ATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAG 2622158
Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818
||||| | ||||||| ||||||||||| || || || || || || || ||||
Sbjct 2622157 ATCCATCTAAGAGCCCAGTCGGCCTTCTTCCGTATGCAGGGGATGGTGTCGATAGCATCG 2622098
Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33878
|| || || | || || || ||| || || || || ||||| | || |||||
Sbjct 2622097 AACAGGTATGTCTTCTCTTTGGGATCCTTCACGTATGTGTCGATGAGGAGTGAGTACATC 2622038
Query 33879 TCCGAATGAATGTTTTCAAT 33898
|| || || || || || ||
Sbjct 2622037 TCAGAGTGGATATTCTCCAT 2622018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817481909200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |