Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq8 212 8e-50 >seq8 Length=1658097 Score = 212 bits (234), Expect = 8e-50 Identities = 646/981 (66%), Gaps = 52/981 (5%) Strand=Plus/Minus Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 65801 || |||| ||| || || || ||||||| || | | | | | ||||| ||||| Sbjct 1351015 GAAGCCAAATTGCAGACAGCAACCTCATCAGGCGCTGTGAACTCGACGATCTCGGTGCAG 1350956 Query 65802 AGATTACTACACTTG--ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 65859 ||||| | ||| ||||| || || || | || || ||||| | || || |||| Sbjct 1350955 AGATT--TGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTATTGCAGGCAT 1350898 Query 65860 CCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 65919 |||| || || ||| | ||||| ||||| ||| |||||| || | |||||| | ||| | Sbjct 1350897 CCTTGTAGAGCATGTAGGGAGTCCCAGTCTCAGTCTGAGCCTCAAGAATCGCATACCACA 1350838 Query 65920 CGACTC-GAGCCTTTA-----TTATAGATTTGTATCTCTTTTC----TCTTTCGTATAGT 65969 | || | ||||| | | | | | ||||||| ||| ||||| || Sbjct 1350837 -GCTTCTGGGCCTTGACGGTCTGACGGCCACGGCCCTCTTTTTCATATCTCTCGTAGAGC 1350779 Query 65970 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA 66029 || | ||||||||| || | |||| | ||| || ||| |||| || Sbjct 1350778 --------TCCTG-GAACTCGTCGCCATAGACATCGGCCAGACCTGGAGCCTCATGAGGG 1350728 Query 66030 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 66089 || | | | |||||| || | || || || | ||| || | ||||| |||| Sbjct 1350727 CAGAAAAGAGTCCACTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCAC 1350668 Query 66090 AGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 66148 | ||| ||| || | || | || | ||| || || || |||||| | |||| Sbjct 1350667 ATAGC-ATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTCAGATT 1350609 Query 66149 GAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 66208 ||||| | | | ||| |||||||| |||||||| ||||| | | | || || || Sbjct 1350608 CAGGAAATCGAAGACGTCAGCGTGCCACGGCTCCAAGTAGATGGCGAAAGCACCGGGTCG 1350549 Query 66209 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 66268 ||||| || ||||| || | ||| | || ||||| || |||| | |||||| ||||| Sbjct 1350548 CTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTGAAAACACGCAACATGGGAAT 1350489 Query 66269 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTA 66326 | ||||| ||||| |||||||| || | |||||| ||| |||||||||| | | Sbjct 1350488 GAGTCCATTTGATGTCCCATTGGTTCCTGCAATATAGGAGCCAGTTGCACGAATGCAGTG 1350429 Query 66327 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 66386 ||||| |||| || || || || | || ||||| | || || || | ||| Sbjct 1350428 AGCATTGA--GACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGCGTG 1350371 Query 66387 TCATAGATGCCCTCTATACTATCATCCATCATG----TTAAGTAGAAA----ACAGCTAG 66438 || ||||||||||| || ||||||||| ||||| | ||| || || |||||| | Sbjct 1350370 TCGTAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAAGAGGACAGCT-G 1350312 Query 66439 ACATT-TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 66497 | || |||| ||||| ||||| || | || || || || || || || || Sbjct 1350311 AGGTTGTGGT--------GTTCCGGCATTGAAGAGCGTGGGTGATGCATGAGTGAAGCAC 1350260 Query 66498 TTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCC 66556 || | || | || ||||| |||||||| || || ||||| || | || || || Sbjct 1350259 TTCTGGGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCATCACCG-TGGATGCC 1350201 Query 66557 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCA 66615 || || |||||||| | ||||||||| |||| ||| ||| |||| ||| ||||||| Sbjct 1350200 AACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGA-CTTGCTTGCCGATTTTCA 1350142 Query 66616 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 66675 || ||| ||||| || || || || || ||||| || | ||| ||||||| || | Sbjct 1350141 GCAGGTATGATTTCTCTAACGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCTGTCAT 1350082 Query 66676 AAATAATAACCGAGTTGAGTT 66696 | | ||| ||||||| |||| Sbjct 1350081 AGACAATGGCCGAGTTCAGTT 1350061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172676592600