Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq2 131 2e-25 >seq2 Length=3515922 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | || ||||| | || ||||| || || ||||| ||||||||| Sbjct 2794694 CCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGCTC 2794753 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || |||||||||||||| || |||| || || |||||||| ||||| Sbjct 2794754 AAGGTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTGCTGATCAGGAGGA 2794813 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| ||| || || | | || | |||||| | | ||| ||| Sbjct 2794814 ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTCGACTCAACC 2794873 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | |||||||||||||| || || ||||| || ||||| Sbjct 2794874 TCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 2794920 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || || ||||| || ||||| || ||| | |||| |||||| || || || || Sbjct 2794496 GTCGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCCG 2794555 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGT-TT 139686 ||| ||||||||||||||||||| || || |||||||| ||||| ||| | || | || Sbjct 2794556 GCAAAGATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTTGTC-TTGAATCTTGCTCTT 2794614 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | || ||| | | ||| ||||||| || | |||||||| || | || Sbjct 2794615 GACGTTGTCGATGGTATCGCTCGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGAGT 2794674 Query 139747 TTTTACGAATATTTGCAT 139764 || || || |||||||| Sbjct 2794675 CTTCACAAAAATTTGCAT 2794692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063906988000