Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq8 199 5e-46
seq1 107 3e-18
>seq8
Length=1658097
Score = 199 bits (220), Expect = 5e-46
Identities = 395/575 (69%), Gaps = 26/575 (5%)
Strand=Plus/Minus
Query 72097 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 72156
|||||| | |||| ||||| | | | |||| |||||||| |||||||| |||||
Sbjct 1350622 TTCTTTCTCAGATTCAGGAAATCGAAGACGTCAGCGTGCCACGGCTCCAAGTAGATGGCG 1350563
Query 72157 ATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 72216
| | | || || || ||||| || ||||| || | ||| | || ||||| || ||||
Sbjct 1350562 AAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTGAAAACA 1350503
Query 72217 CTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG 72276
| |||||| ||||| | ||||| |||| |||||||| || | |||||| ||| |
Sbjct 1350502 CGCAACATGGGAATGAGTCCATTTGATGTCCCATTGGTTCCTGCAATATAGGAGCCAGTT 1350443
Query 72277 GCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 72334
|||||||| | || ||||| |||| || || || || | || ||||| | || |
Sbjct 1350442 GCACGAATGCAGTGAGCATTGA--GACCGATGCCACCAGCGGTCTTGGAGATCATGGCAC 1350385
Query 72335 ATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG----TTAAGTAGA 72390
| || | ||| || ||||||||||| || ||||||||| ||||| | ||| ||
Sbjct 1350384 AGGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGC 1350325
Query 72391 AA----ACAGCTAGACATT-TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 72445
|| |||||| || || |||| ||||| ||||| || | || || || |
Sbjct 1350324 AAGAGGACAGCT-GAGGTTGTGGT--------GTTCCGGCATTGAAGAGCGTGGGTGATG 1350274
Query 72446 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-C 72504
| || || || || || | |||| || ||||| |||||||| || || |||||
Sbjct 1350273 CATGAGTGAAGCACTTCTGGGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCAT 1350214
Query 72505 CATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564
|| | || || || || || |||||||| | ||| ||||| |||| ||| ||| ||||
Sbjct 1350213 CACCG-TGGATGCCAACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGA-CTTG 1350156
Query 72565 -TTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 72623
|| ||||||| || ||| ||||| || || || || || ||||| || | |||
Sbjct 1350155 CTTGCCGATTTTCAGCAGGTATGATTTCTCTAACGTCTTGAAGCCAAAGTATTGGTAGTT 1350096
Query 72624 AAAGTCTCGTTCGTAAATAATAACCGAATTGAGTT 72658
||||||| || || | ||| |||| || ||||
Sbjct 1350095 GAAGTCTCTGTCATAGACAATGGCCGAGTTCAGTT 1350061
>seq1
Length=4142182
Score = 107 bits (118), Expect = 3e-18
Identities = 216/320 (68%), Gaps = 3/320 (1%)
Strand=Plus/Minus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
||||| |||||| ||||| ||||||||| | | || | ||| || ||||| |||||
Sbjct 2622337 CATGCAAAATCGGTGTGCATACCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGA 2622278
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|| ||||| || || | || ||||| || || || ||||||||||| || ||||||
Sbjct 2622277 CCTGGCATCAGACCCTTGCTCTTGAGCCAGAAGATTGAAGCAAATGATCCGGAGAAGAAG 2622218
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 42241
|| || || || || || || |||| |||| | | || || | | |||
Sbjct 2622217 ATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAG 2622158
Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301
||||| | ||||||| ||||||||||| || || || || || || || ||||
Sbjct 2622157 ATCCATCTAAGAGCCCAGTCGGCCTTCTTCCGTATGCAGGGGATGGTGTCGATAGCATCG 2622098
Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361
|| || || | || || || ||| || || ||||| ||||| | || |||||
Sbjct 2622097 AACAGGTATGTCTTCTCTTTGGGATCCTTCACGTATGTGTCGATGAGGAGTGAGTACATC 2622038
Query 42362 TCTGAATGAATGTTTTCAAT 42381
|| || || || || || ||
Sbjct 2622037 TCAGAGTGGATATTCTCCAT 2622018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139074161400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |