Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2 127 2e-24 >seq2 Length=3515922 Score = 127 bits (140), Expect = 2e-24 Identities = 175/242 (72%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||| |||| | || | ||||||||||| || || ||||| || | Sbjct 2794681 AAAAATTTGCATTCCACCTCGGAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGAT 2794740 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| |||||||||| ||| | |||||| |||||||| ||| | ||||| | | || Sbjct 2794741 GTTGTAATCGCTCAAGGTGCGGCCATCCTCGAGCTGTTTACCGGCGAAGATGAGGCGCTG 2794800 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 |||||| |||||||| ||||| ||||| | || || |||||| | ||| ||||| Sbjct 2794801 CTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTC 2794860 Query 94948 AGCGTG-GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 || | || || || | |||||||| || || || | ||| || || |||||||||| Sbjct 2794861 -GCTCGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCA 2794919 Query 95007 TG 95008 || Sbjct 2794920 TG 2794921 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869 ||| ||||| || || | ||| || ||| | ||| | || || || || ||||| Sbjct 2794495 AGTCGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGTTGCTTTCC 2794554 Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929 | ||||||| | | ||||||||| || || || ||||| ||||| | ||| || ||| Sbjct 2794555 GGCAAAGATCAGACGTTGCTGATCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGCTCTT 2794614 Query 94930 GACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 |||| | ||| || || || | || || |||| ||| ||||| || |||||||||| Sbjct 2794615 GACGTTGTCGATGGTATC-GCTCGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGAG 2794673 Query 94989 TTTTCACAAAGATCTGCAT 95007 | |||||||| || ||||| Sbjct 2794674 TCTTCACAAAAATTTGCAT 2794692 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/200 (70%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTT 94867 ||| |||||||| || | ||| || || | | || ||| | ||||| ||||| || Sbjct 2794267 AGTGGATTCCTTCTGAATGTTGTAGTC--TGAGAGAGTTCGGCCGTCCTCGAGCTGCTTG 2794324 Query 94868 CCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCC 94927 ||| | ||||| |||| |||||| || || || || || || ||||| | || || | | Sbjct 2794325 CCGGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTCGAC 2794384 Query 94928 TTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGA 94987 |||||| | | | || || | ||||| || | ||||| || || || || ||| Sbjct 2794385 TTGACGTTGTCAATCGTATCTGAAGATTCGACCTCTAGTGTGATCGTCTTGCCGGTCAGA 2794444 Query 94988 GTTTTCACAAAGATCTGCAT 95007 ||||| || ||||||||||| Sbjct 2794445 GTTTTGACGAAGATCTGCAT 2794464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291115945400