Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq5 150 3e-32
seq2 123 4e-24
>seq5
Length=2445035
Score = 150 bits (166), Expect = 3e-32
Identities = 159/207 (77%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||| | ||||||| ||||| | || || ||||||||||| ||||||||||| || ||
Sbjct 1717869 GCCAAGAGACATCGCAAGATCT-TGCGCGACAACATCCAAGGTATCACCAAGCCTGCCAT 1717811
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|| ||||| ||||||||||| || ||||||||| |||| | || |||| |||||||
Sbjct 1717810 TCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGAC 1717751
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||||| ||| ||||| |||||| | | || |||| || ||| || ||| |||||
Sbjct 1717750 TCGTGGTGTCCTGAAGTCATTCCTCGAATCTGTCATCCGCGACGCTGTCACCTACACCGA 1717691
Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638
||||| || | ||||| ||||||||
Sbjct 1717690 ACACGCAAAGAGAAAGACCGTCACCTC 1717664
>seq2
Length=3515922
Score = 123 bits (136), Expect = 4e-24
Identities = 153/207 (74%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||| | ||||||| ||| | | || || ||||||||||| ||||||||||| || ||
Sbjct 1446356 GCGAAGAGACATCGCAAGATTT-TGCGCGACAACATCCAAGGTATCACCAAGCCTGCCAT 1446298
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | ||||| || || |||||||| ||||||||| |||| | || |||| |||||||
Sbjct 1446297 CAGACGTCTTGCCCGACGTGGTGGTGTCAAGCGTATCTCGGCCATGATCTACGAAGAGAC 1446238
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | |||| ||||||| | || |||| ||||| || || |||||
Sbjct 1446237 CCGAGGTGTCCTCAAGACCTTCCTCGAAGGTGTCATCCGAGATGCCGTCACATACACCGA 1446178
Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638
||||| || | ||||| ||||| ||
Sbjct 1446177 ACACGCAAAGAGAAAGACCGTCACGTC 1446151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075186285395
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |