Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 150 3e-32 seq2 123 4e-24 >seq5 Length=2445035 Score = 150 bits (166), Expect = 3e-32 Identities = 159/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||| | ||||||| ||||| | || || ||||||||||| ||||||||||| || || Sbjct 1717869 GCCAAGAGACATCGCAAGATCT-TGCGCGACAACATCCAAGGTATCACCAAGCCTGCCAT 1717811 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| ||||||||||| || ||||||||| |||| | || |||| ||||||| Sbjct 1717810 TCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGAC 1717751 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| ||||| |||||| | | || |||| || ||| || ||| ||||| Sbjct 1717750 TCGTGGTGTCCTGAAGTCATTCCTCGAATCTGTCATCCGCGACGCTGTCACCTACACCGA 1717691 Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638 ||||| || | ||||| |||||||| Sbjct 1717690 ACACGCAAAGAGAAAGACCGTCACCTC 1717664 >seq2 Length=3515922 Score = 123 bits (136), Expect = 4e-24 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||| | ||||||| ||| | | || || ||||||||||| ||||||||||| || || Sbjct 1446356 GCGAAGAGACATCGCAAGATTT-TGCGCGACAACATCCAAGGTATCACCAAGCCTGCCAT 1446298 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | ||||| || || |||||||| ||||||||| |||| | || |||| ||||||| Sbjct 1446297 CAGACGTCTTGCCCGACGTGGTGGTGTCAAGCGTATCTCGGCCATGATCTACGAAGAGAC 1446238 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | |||| ||||||| | || |||| ||||| || || ||||| Sbjct 1446237 CCGAGGTGTCCTCAAGACCTTCCTCGAAGGTGTCATCCGAGATGCCGTCACATACACCGA 1446178 Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638 ||||| || | ||||| ||||| || Sbjct 1446177 ACACGCAAAGAGAAAGACCGTCACGTC 1446151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075186285395