Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq8 206 3e-48 >seq8 Length=1658097 Score = 206 bits (228), Expect = 3e-48 Identities = 639/972 (66%), Gaps = 34/972 (3%) Strand=Plus/Minus Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957 || |||| ||| || || || ||||||| || | | | | | ||||| ||||| Sbjct 1351015 GAAGCCAAATTGCAGACAGCAACCTCATCAGGCGCTGTGAACTCGACGATCTCGGTGCAG 1350956 Query 62958 AGATTACTACACTTG--ATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 63015 ||||| | ||| || || || || || | || || ||||| | || || |||| Sbjct 1350955 AGATT--TGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTATTGCAGGCAT 1350898 Query 63016 CCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 63075 |||| || || ||| | ||||| ||||| ||| |||||| || | |||||| | ||| | Sbjct 1350897 CCTTGTAGAGCATGTAGGGAGTCCCAGTCTCAGTCTGAGCCTCAAGAATCGCATACCACA 1350838 Query 63076 CGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAAT 63134 | || | ||||| | | | | | ||| |||| ||| || | Sbjct 1350837 -GCTTCTGGGCCTTGACGGTCTGACGGCCACGGCCCTCTTTTTCATATCTCTCGTAGAGC 1350779 Query 63135 CGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAAC 63194 | ||||||||| || | |||| | ||| || ||| |||| || || | | Sbjct 1350778 TCCTGGAACTCGTCGCCATAGACATCGGCCAGACCTGGAGCCTCATGAGGGCAGAAAAGA 1350719 Query 63195 GACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 63254 | |||||| || | || || || | ||| || | ||||| |||| | ||| ||| Sbjct 1350718 GTCCACTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCACATAGC-ATA 1350660 Query 63255 -AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 63313 || || || | || | ||| || || || |||||| | |||| ||||| | Sbjct 1350659 GAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTCAGATTCAGGAAATC 1350600 Query 63314 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 63373 | | |||| |||||||| |||||||| ||||| | | | || || || ||||| || Sbjct 1350599 GAAGACGTCAGCGTGCCACGGCTCCAAGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCC 1350540 Query 63374 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTT 63433 ||||| || | ||| | || ||||| || |||| | |||||| ||||| | || || Sbjct 1350539 GCCCTGGTCGACGTAGCGGGCCGTGTTGTTGAAAACACGCAACATGGGAATGAGTCCATT 1350480 Query 63434 TGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGAT 63491 |||| | |||||||| || | |||||| ||| | |||||||| | | ||||| Sbjct 1350479 TGATGTCCCATTGGTTCCTGCAATATAGGAGCCAGTTGCACGAATGCAGTGAGCATTGA- 1350421 Query 63492 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATA 63551 |||| || || || || | || ||||| | || || || | |||||| ||||| Sbjct 1350420 -GACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGCGTGTCGTAGATG 1350362 Query 63552 CCCTCTATGCTATCATCGATCATG----TTAAGTAGAAA----ACAGCTAGACATT-TGG 63602 ||||| ||||||||||| ||||| | ||| || || |||||| || || ||| Sbjct 1350361 CCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAAGAGGACAGCT-GAGGTTGTGG 1350303 Query 63603 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 63662 | ||||| ||||| || | || || || || || || || || || | || Sbjct 1350302 T--------GTTCCGGCATTGAAGAGCGTGGGTGATGCATGAGTGAAGCACTTCTGGGAC 1350251 Query 63663 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGAC 63721 | || ||||| |||||||| || || ||||| || | || || || || || || Sbjct 1350250 ATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCATCACCG-TGGATGCCAACAGCCAC 1350192 Query 63722 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGG 63780 |||||| | ||||||||| |||| ||| ||| |||| ||| ||||||| || ||| | Sbjct 1350191 ACGCATAATCATGTGCTGTGGTCGTTCGGCGA-CTTGCTTGCCGATTTTCAGCAGGTATG 1350133 Query 63781 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 63840 |||| || || || || || ||||| || | ||| ||||||| || || | ||| Sbjct 1350132 ATTTCTCTAACGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCTGTCATAGACAATGG 1350073 Query 63841 CCGAGTTGAGTT 63852 ||||||| |||| Sbjct 1350072 CCGAGTTCAGTT 1350061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947083197400