Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq8 352 7e-92 seq1 86.0 2e-11 >seq8 Length=1658097 Score = 352 bits (390), Expect = 7e-92 Identities = 1116/1711 (65%), Gaps = 34/1711 (2%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 ||||| || ||||| ||| | |||||||| ||| |||| ||||| | ||| |||| Sbjct 1350165 GAACGACCACAGCACATGATTATGCGTGTGGCTGTTGGCATCCACGGTGATGATATTGAG 1350224 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCACGCCAA 363565 || ||||| ||||| || || | || | | || ||||| || || | || | Sbjct 1350225 AAGGCCATTGAGACATACAACCTCAT--GTCCCAGAAGTGCTTCACTCATGCATCACCCA 1350282 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | | |||||| ||||| | | || ||| |||| |||||||| | | | |||| Sbjct 1350283 CGCTCTTCAATGCCGGAACACCACAACCTCAGCTGTCCTCTTGCTTCTTGATCGACATGA 1350342 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||| ||| ||||||||| |||| ||||| || |||| ||||| | || ||||||| Sbjct 1350343 AGGATGATAGCATCGAGGGCATCTACGACACGCTCAAGACCTGTGCCATGATCTCCAAGA 1350402 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGCACAGAACAGTTACATTCG 363743 || || || || ||| | | || | || || |||||||| | || ||| Sbjct 1350403 CCGCTGGTGGCATCGGTCT--CAATGCTCACTGCATTCGTGCAACTGGCTCCTATATTGC 1350460 Query 363744 CGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802 || || | |||| | || ||||| || |||||||| | ||||| || |||| || | Sbjct 1350461 AGGAACCAATGGGACA-TCAAATGGACTCATTCCCATGTTGCGTGTTTTCAACAACACGG 1350519 Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862 | | |||||||||||||| || ||||| || || || || || || | |||| Sbjct 1350520 CCCGCTACGTCGACCAGGGCGGCAACAAGCGACCCGGTGCTTTCGCCATCTACTTGGAGC 1350579 Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922 | || || || | || || || || | || | || ||| || || || ||| Sbjct 1350580 CGTGGCACGCTGACGTCTTCGATTTCCTGAATCTGAGAAAGAACCACGGCAAGGAAGAAG 1350639 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982 | ||||| ||||| ||||||||||| | ||| ||||| || ||| |||| || | Sbjct 1350640 TCCGTGCCCGTGACCTGTTCTATGCTATGTGGACCCCTGACTTGTTCATGGAGCGTGTCG 1350699 Query 363983 AGGCAGGTA--AGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040 || | | | || | ||| | || || ||||| || || ||||||||| ||||||| Sbjct 1350700 AG--AAGAACCAGGAGTGGACTCTTTTCTGCCCTCATGAGGCTCCAGGTCTGGCCGATGT 1350757 Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAA 364100 | || ||||| | | || ||||| | |||||| ||||| | ||| | Sbjct 1350758 CTATGGCGACGAGTTCCAGGAGCTCTACGAGAGATATGAAAAAGAGGGCCGTGGCCGTCA 1350817 Query 364101 GACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160 ||| | || |||||||| |||| ||| || | || | |||| |||||| || || Sbjct 1350818 GACCGTCAAGGCCCAGAAGCTGTGGTATGCGATTCTTGAGGCTCAGACTGAGACTGGGAC 1350877 Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220 ||||| ||| | ||||| ||| | ||||| | ||| ||||||| || || | || || Sbjct 1350878 TCCCTACATGCTCTACAAGGATGCCTGCAATAGGAAGAGCAACCAGAAGAACTTGGGCAC 1350937 Query 364221 AATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279 |||| | || | || || || |||||||| | || | ||| || || || ||| || Sbjct 1350938 CATTC-GAAGCTCAAATCTCTGCACCGAGATCGTCGAGTTCACAGCGCCTGATGAGGTTG 1350996 Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGA------TGGTACTT 364333 | || || || | || || | || ||||| | ||||| | | ||| | Sbjct 1350997 CTGTCTGCAATTTGGCTTCCCTGGCTCTTCCCACTTTTGTCGACCAACCCCGTGGCGAGT 1351056 Query 364334 TTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTA 364393 |||| | | ||| |||| || || | | || ||||| | |||| | | Sbjct 1351057 ATGACTTCGGCCGCCTTCATGAGGTCACTCAGGTCGTCACCCGCAATTTGAACAAAATCA 1351116 Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGA 364453 |||||| || || || || ||||||| ||| | |||||||| ||||| || | Sbjct 1351117 TCGACATCAACTACTACCCGGTTCCTGAGGCCAGGAAGAGCAATATGCGACATCGACCTA 1351176 Query 364454 TTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGA 364511 | || ||||| || || || || || || | || | ||||| || | ||||| Sbjct 1351177 TCGGCCTTGGGGTCCAAGGTCTTGCAGATGCCTTCCT--TGCTCTGCGTCTGCCCTTTGA 1351234 Query 364512 TTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAAT 364571 || || || ||||| || || | |||||||||| || || || || || | Sbjct 1351235 CTCTCCAGAGGCTCGACAACTGAACATCCAGATCTTTGAGACCATCTACCACGCGGCTCT 1351294 Query 364572 GACTGCTTCGTGTGATTTGGCAAAA-ACCAAGGGAAAGTACTCTACTTATGAGGGGTCCC 364630 ||||| ||||| || | |||||| | ||||| | | || || || ||||| || Sbjct 1351295 CACTGCATCGTGCGAACTTGCAAAAGAGCAAGGCACA-TATGAGACATACGAGGGCAGCC 1351353 Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGA 364690 | | || || || | |||||| ||| | ||||||||||| ||||| | || ||| Sbjct 1351354 CAGTCTCACAAGGCATTCTCCAGTATGACATGTGGAATGTCACCCCATCCGACCTGTGGG 1351413 Query 364691 ACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTC---CCTCGTTA 364747 | ||||| | | || || || || ||||| ||||||||| ||||||| Sbjct 1351414 ATTGGGACTCCTTGAAAGCCGACATTGCCAAATATGGTGTTCGCAACTCTCTCCTCGTT- 1351472 Query 364748 CAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAAC 364807 || || ||||| || || || || | |||||||| || |||||||| |||||||| | Sbjct 1351473 --GCTCCTATGCCTACCGCGTCAACCTCCCAGATCCTGGGCAACAACGAATGCTTCGAGC 1351530 Query 364808 CGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATA 364867 | | ||| ||| | || || || || || || | || || || | ||| || || Sbjct 1351531 CATATACTTCCAACATCTACTCCCGTCGTGTCCTGGCTGGTGAGTTCCAGGTCGTCAACC 1351590 Query 364868 AGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATA 364927 | || | |||||||| ||||| || || ||| |||| |||||||||| || Sbjct 1351591 CATGGCTCTTGAAGGATCTGGTCGACCTTGGTCTCTGGTCAGACAACATGAAGAACCGTA 1351650 Query 364928 TCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTA 364987 ||||||||| |||||| || ||||||||||| | || | || | ||| | Sbjct 1351651 TCATCGCCGAGGGTGGTTCGGTTCAGAACATTCCCAACATCCCTGCCGACATCAAGGCAC 1351710 Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCG 365047 | ||||| || || |||||||| | || ||| || | | ||||| |||||||| | Sbjct 1351711 TGTACAAGACTGTCTGGGAAATCAGCCAACGGACTATCCTCCAGATGGCAGCCGATCGGG 1351770 Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCA 365107 | || || ||| ||| ||| || | ||| | | ||| | || ||| | || Sbjct 1351771 GAGCCTTCATCGACCAGTCCCAATCTCTAAACATCCACTTGAAAGAACCCACCATGGGCA 1351830 Query 365108 AGCTTACATCCATGCATTTCTACGGGTGGAA 365138 | | ||||||||||| ||| ||| ||||| Sbjct 1351831 AAATCACATCCATGCACTTCGCCGGCTGGAA 1351861 >seq1 Length=4142182 Score = 86.0 bits (94), Expect = 2e-11 Identities = 150/214 (70%), Gaps = 11/214 (5%) Strand=Plus/Plus Query 22437 GAATAAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTTCA--TTCGCGGAA 22491 ||| ||||| || ||||| || | |||||| | || || || || ||||| || Sbjct 2622128 GAAGAAGGCCGACTGGGCTCTTAGATGGATCTCTGATAAGGA--GTCCACTTTCGCTCAA 2622185 Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551 || || |||| || || | || || || || ||||| || ||| ||||| | ||||| Sbjct 2622186 CGACTGGTTGCTTTCGCAGCCGTCGAGGGTATCTTCTTCTCCGGATCATTTGCTTCAATC 2622245 Query 22552 TTTTGGCTaaaaa--aaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTA 22609 || ||||| || | || | | | ||||| ||||| || ||||||||||| | || Sbjct 2622246 TTCTGGCTCAAGAGCAAGGGTC--TGATGCCAGGTCTCACCTTTTCAAATGAACTCATCT 2622303 Query 22610 GCCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643 || ||||||||| | || ||||||||||| || Sbjct 2622304 CTCGTGATGAGGGTATGCACACCGATTTTGCATG 2622337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353349511730