Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 seq5 89.7 4e-13 >seq2 Length=3515922 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || || || || || || ||||||| | ||||||||| | Sbjct 2794237 AATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTC 2794178 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| || | |||||| |||||| ||||| || ||||| || ||||| || Sbjct 2794177 AGACACCATTGACAATGTCAAATCAAAGATCCAAGACAAGGAGGGCATCCCACCCGACCA 2794118 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||||||||| | || |||||||| || || |||| | ||| | ||| || || Sbjct 2794117 GCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTACAA 2794058 Query 24170 CATTCAAAAAGA 24181 |||||| || || Sbjct 2794057 CATTCAGAAGGA 2794046 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || || | || ||| |||| || ||| | | | Sbjct 2794920 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGAGC 2794861 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| |||||||| ||||| ||||| Sbjct 2794860 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 2794801 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || ||| || || ||||| |||| | | | | | |||||||| ||| Sbjct 2794800 CAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATTACAAC 2794741 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 2794740 ATCCAGAAGGAGTCGAC 2794724 >seq5 Length=2445035 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| |||| ||||| || ||||| ||||| | |||||| ||||| ||| Sbjct 1847709 ATCACCCTCGAGGTCGAATCCTCAGACACAATCGACAATGTCAAATCCAAGATCCAAGAC 1847768 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || ||||| || || || || ||| ||||||| | || |||||||||||||||||| Sbjct 1847769 AAGGAGGGCATCCCACCTGACCAGCAGCGACTGATCTTCGCCGGCAAGCAACTCGAAGAC 1847828 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | | | | ||||| || || |||||||| Sbjct 1847829 GGCCGTACGTTGAGCGACTACAATATTCAAAA 1847860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935921402325