Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 2e-18
seq5 89.7 4e-13
>seq2
Length=3515922
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | ||||| || || || || || || ||||||| | ||||||||| |
Sbjct 2794237 AATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTC 2794178
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|||||||| || | |||||| |||||| ||||| || ||||| || ||||| ||
Sbjct 2794177 AGACACCATTGACAATGTCAAATCAAAGATCCAAGACAAGGAGGGCATCCCACCCGACCA 2794118
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||||||||||| | || |||||||| || || |||| | ||| | ||| || ||
Sbjct 2794117 GCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTACAA 2794058
Query 24170 CATTCAAAAAGA 24181
|||||| || ||
Sbjct 2794057 CATTCAGAAGGA 2794046
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || || || || || | || ||| |||| || ||| | | |
Sbjct 2794920 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGAGC 2794861
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| ||||| ||||| |||||||| ||||| |||||
Sbjct 2794860 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 2794801
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | || || | || ||| || || ||||| |||| | | | | | |||||||| |||
Sbjct 2794800 CAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATTACAAC 2794741
Query 24171 ATTCAAAAAGAATCTAC 24187
|| || || || || ||
Sbjct 2794740 ATCCAGAAGGAGTCGAC 2794724
>seq5
Length=2445035
Score = 89.7 bits (98), Expect = 4e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086
|| ||| |||| ||||| || ||||| ||||| | |||||| ||||| |||
Sbjct 1847709 ATCACCCTCGAGGTCGAATCCTCAGACACAATCGACAATGTCAAATCCAAGATCCAAGAC 1847768
Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146
|| || ||||| || || || || ||| ||||||| | || ||||||||||||||||||
Sbjct 1847769 AAGGAGGGCATCCCACCTGACCAGCAGCGACTGATCTTCGCCGGCAAGCAACTCGAAGAC 1847828
Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178
| | | | | ||||| || || ||||||||
Sbjct 1847829 GGCCGTACGTTGAGCGACTACAATATTCAAAA 1847860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935921402325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |