Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq8 230 3e-55
>seq8
Length=1658097
Score = 230 bits (254), Expect = 3e-55
Identities = 650/981 (66%), Gaps = 52/981 (5%)
Strand=Plus/Minus
Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812
|| |||| ||| || || || ||||||| || | | | | | ||||| |||||
Sbjct 1351015 GAAGCCAAATTGCAGACAGCAACCTCATCAGGCGCTGTGAACTCGACGATCTCGGTGCAG 1350956
Query 62813 AGATTACTACACTTG--ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 62870
||||| | ||| ||||| || || || | || || ||||| | || || ||||
Sbjct 1350955 AGATT--TGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTATTGCAGGCAT 1350898
Query 62871 CCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 62930
|||| || || ||| | ||||| ||||| ||| |||||| || | |||||| | ||| |
Sbjct 1350897 CCTTGTAGAGCATGTAGGGAGTCCCAGTCTCAGTCTGAGCCTCAAGAATCGCATACCACA 1350838
Query 62931 CGACTC-GAGCCTTTA-----TTATAGATTTGTATCTCTTTTC----TCTTTCGTATAGT 62980
| || | ||||| | | | | | ||||||| ||| ||||| ||
Sbjct 1350837 -GCTTCTGGGCCTTGACGGTCTGACGGCCACGGCCCTCTTTTTCATATCTCTCGTAGAGC 1350779
Query 62981 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGA 63040
|| | ||||||||| || | |||| | |||| || ||| |||| ||
Sbjct 1350778 --------TCCTG-GAACTCGTCGCCATAGACATCGGCCAGACCTGGAGCCTCATGAGGG 1350728
Query 63041 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63100
|| | | | |||||| || | || || || | ||| || | ||||| ||||
Sbjct 1350727 CAGAAAAGAGTCCACTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCAC 1350668
Query 63101 AGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63159
| ||| ||| || || || | || | ||| || || || |||||| | ||||
Sbjct 1350667 ATAGC-ATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTCAGATT 1350609
Query 63160 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63219
||||| | | | |||| |||||||| |||||||| ||||| | | | || || ||
Sbjct 1350608 CAGGAAATCGAAGACGTCAGCGTGCCACGGCTCCAAGTAGATGGCGAAAGCACCGGGTCG 1350549
Query 63220 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63279
||||| || ||||| || | ||| | || ||||| || |||| | |||||| |||||
Sbjct 1350548 CTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTGAAAACACGCAACATGGGAAT 1350489
Query 63280 AATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTA 63337
| ||||| ||||| |||||||| |||| |||||| ||| | |||||||| | |
Sbjct 1350488 GAGTCCATTTGATGTCCCATTGGTTCCTGCAATATAGGAGCCAGTTGCACGAATGCAGTG 1350429
Query 63338 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 63397
||||| |||| || || || || | || ||||| | || || || | |||
Sbjct 1350428 AGCATTGA--GACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGCGTG 1350371
Query 63398 TCATAGATGCCCTCTATACTATCATCCATCATG----TTAAGTAGAAA----ACAGCTAG 63449
|| ||||||||||| || ||||||||| ||||| | ||| || || |||||| |
Sbjct 1350370 TCGTAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAAGAGGACAGCT-G 1350312
Query 63450 ACATT-TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCAT 63508
| || |||| ||||| ||||| || | || || || || ||||| || ||
Sbjct 1350311 AGGTTGTGGT--------GTTCCGGCATTGAAGAGCGTGGGTGATGCATGAGTGAAGCAC 1350260
Query 63509 TTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCC 63567
|| | || | || ||||| |||||||| || || ||||| || | || || ||
Sbjct 1350259 TTCTGGGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCATCACCG-TGGATGCC 1350201
Query 63568 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCA 63626
|| || |||||||| | ||||||||| |||| ||| ||| |||| ||| |||||||
Sbjct 1350200 AACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGA-CTTGCTTGCCGATTTTCA 1350142
Query 63627 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 63686
|| ||| ||||| || || || || || ||||| || | ||| ||||||| || |
Sbjct 1350141 GCAGGTATGATTTCTCTAACGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCTGTCAT 1350082
Query 63687 AAATAATAACCGAGTTGAGTT 63707
| | ||| ||||||| ||||
Sbjct 1350081 AGACAATGGCCGAGTTCAGTT 1350061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631881194000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |