Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq8 230 3e-55 >seq8 Length=1658097 Score = 230 bits (254), Expect = 3e-55 Identities = 650/981 (66%), Gaps = 52/981 (5%) Strand=Plus/Minus Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812 || |||| ||| || || || ||||||| || | | | | | ||||| ||||| Sbjct 1351015 GAAGCCAAATTGCAGACAGCAACCTCATCAGGCGCTGTGAACTCGACGATCTCGGTGCAG 1350956 Query 62813 AGATTACTACACTTG--ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 62870 ||||| | ||| ||||| || || || | || || ||||| | || || |||| Sbjct 1350955 AGATT--TGAGCTTCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTCCTATTGCAGGCAT 1350898 Query 62871 CCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 62930 |||| || || ||| | ||||| ||||| ||| |||||| || | |||||| | ||| | Sbjct 1350897 CCTTGTAGAGCATGTAGGGAGTCCCAGTCTCAGTCTGAGCCTCAAGAATCGCATACCACA 1350838 Query 62931 CGACTC-GAGCCTTTA-----TTATAGATTTGTATCTCTTTTC----TCTTTCGTATAGT 62980 | || | ||||| | | | | | ||||||| ||| ||||| || Sbjct 1350837 -GCTTCTGGGCCTTGACGGTCTGACGGCCACGGCCCTCTTTTTCATATCTCTCGTAGAGC 1350779 Query 62981 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGA 63040 || | ||||||||| || | |||| | |||| || ||| |||| || Sbjct 1350778 --------TCCTG-GAACTCGTCGCCATAGACATCGGCCAGACCTGGAGCCTCATGAGGG 1350728 Query 63041 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63100 || | | | |||||| || | || || || | ||| || | ||||| |||| Sbjct 1350727 CAGAAAAGAGTCCACTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCAGGGGTCCAC 1350668 Query 63101 AGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63159 | ||| ||| || || || | || | ||| || || || |||||| | |||| Sbjct 1350667 ATAGC-ATAGAACAGGTCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCTCAGATT 1350609 Query 63160 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63219 ||||| | | | |||| |||||||| |||||||| ||||| | | | || || || Sbjct 1350608 CAGGAAATCGAAGACGTCAGCGTGCCACGGCTCCAAGTAGATGGCGAAAGCACCGGGTCG 1350549 Query 63220 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63279 ||||| || ||||| || | ||| | || ||||| || |||| | |||||| ||||| Sbjct 1350548 CTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTGAAAACACGCAACATGGGAAT 1350489 Query 63280 AATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTA 63337 | ||||| ||||| |||||||| |||| |||||| ||| | |||||||| | | Sbjct 1350488 GAGTCCATTTGATGTCCCATTGGTTCCTGCAATATAGGAGCCAGTTGCACGAATGCAGTG 1350429 Query 63338 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 63397 ||||| |||| || || || || | || ||||| | || || || | ||| Sbjct 1350428 AGCATTGA--GACCGATGCCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGCGTG 1350371 Query 63398 TCATAGATGCCCTCTATACTATCATCCATCATG----TTAAGTAGAAA----ACAGCTAG 63449 || ||||||||||| || ||||||||| ||||| | ||| || || |||||| | Sbjct 1350370 TCGTAGATGCCCTCGATGCTATCATCCTTCATGTCGATCAAGAAGCAAGAGGACAGCT-G 1350312 Query 63450 ACATT-TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCAT 63508 | || |||| ||||| ||||| || | || || || || ||||| || || Sbjct 1350311 AGGTTGTGGT--------GTTCCGGCATTGAAGAGCGTGGGTGATGCATGAGTGAAGCAC 1350260 Query 63509 TTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCC 63567 || | || | || ||||| |||||||| || || ||||| || | || || || Sbjct 1350259 TTCTGGGACATGAGGTTGTATGTCTCAATGGCCTTCTCAATATCATCACCG-TGGATGCC 1350201 Query 63568 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCA 63626 || || |||||||| | ||||||||| |||| ||| ||| |||| ||| ||||||| Sbjct 1350200 AACAGCCACACGCATAATCATGTGCTGTGGTCGTTCGGCGA-CTTGCTTGCCGATTTTCA 1350142 Query 63627 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 63686 || ||| ||||| || || || || || ||||| || | ||| ||||||| || | Sbjct 1350141 GCAGGTATGATTTCTCTAACGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCTGTCAT 1350082 Query 63687 AAATAATAACCGAGTTGAGTT 63707 | | ||| ||||||| |||| Sbjct 1350081 AGACAATGGCCGAGTTCAGTT 1350061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631881194000