Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 120 3e-22
seq5 91.5 1e-13
>seq2
Length=3515922
Score = 120 bits (132), Expect = 3e-22
Identities = 168/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
|| ||||| || || || |||||||||||||| || ||||||| |||| || ||||||
Sbjct 2794923 ACCATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCG 2794864
Query 25056 TCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
||||| ||||| || || ||| || ||| ||||| ||||| ||||| ||||
Sbjct 2794863 AGCGACACCATCGA--CAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTG 2794806
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
| || ||||| | || || ||||| ||||| | || |||| ||||| || ||||||
Sbjct 2794805 ATCAGCAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATT 2794746
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|||| || || || || || || | || || || || | || |||| ||||
Sbjct 2794745 ACAACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTCCGAGGTGGAA 2794692
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/221 (69%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| ||||||||||| || || | || || | ||||| ||| ||
Sbjct 2794237 AATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTC 2794178
Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || || || || ||| ||| ||||| || || || ||||| |||
Sbjct 2794177 AGACACCATTGA--CAATGTCAAATCAAAGATCCAAGACAAGGAGGGCATCCCACCCGAC 2794120
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||| | | || || || ||||| || | || |||| || || || ||| |||
Sbjct 2794119 CAGCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTAC 2794060
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
|| ||||| || || ||| | ||||| ||||| || ||
Sbjct 2794059 AACATTCAGAAGGAGAGCACCTTGCATTTGGTGCTGAGACT 2794019
>seq5
Length=2445035
Score = 91.5 bits (100), Expect = 1e-13
Identities = 130/181 (72%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||| | || || || ||||||| |||| || || || || ||||| |||
Sbjct 1847682 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCAGACACAATC 1847741
Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125
|| || || || || ||| ||||| || || || ||||||||||| |||||
Sbjct 1847742 GA--CAATGTCAAATCCAAGATCCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCGAC 1847799
Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185
| || || |||||||| ||| | ||||| | || || || |||| |||||||||||||
Sbjct 1847800 TGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACGTTGAGCGACTACAATATTCAAA 1847859
Query 25186 A 25186
|
Sbjct 1847860 A 1847860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327920782225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |