Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2 120 3e-22 seq5 91.5 1e-13 >seq2 Length=3515922 Score = 120 bits (132), Expect = 3e-22 Identities = 168/234 (72%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || ||||| || || || |||||||||||||| || ||||||| |||| || |||||| Sbjct 2794923 ACCATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCG 2794864 Query 25056 TCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 ||||| ||||| || || ||| || ||| ||||| ||||| ||||| |||| Sbjct 2794863 AGCGACACCATCGA--CAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTG 2794806 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 | || ||||| | || || ||||| ||||| | || |||| ||||| || |||||| Sbjct 2794805 ATCAGCAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATT 2794746 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 |||| || || || || || || | || || || || | || |||| |||| Sbjct 2794745 ACAACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTCCGAGGTGGAA 2794692 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| ||||||||||| || || | || || | ||||| ||| || Sbjct 2794237 AATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTC 2794178 Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || || ||| ||| ||||| || || || ||||| ||| Sbjct 2794177 AGACACCATTGA--CAATGTCAAATCAAAGATCCAAGACAAGGAGGGCATCCCACCCGAC 2794120 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| | | || || || ||||| || | || |||| || || || ||| ||| Sbjct 2794119 CAGCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTAC 2794060 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || ||||| || || ||| | ||||| ||||| || || Sbjct 2794059 AACATTCAGAAGGAGAGCACCTTGCATTTGGTGCTGAGACT 2794019 >seq5 Length=2445035 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| | || || || ||||||| |||| || || || || ||||| ||| Sbjct 1847682 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCAGACACAATC 1847741 Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 || || || || || ||| ||||| || || || ||||||||||| ||||| Sbjct 1847742 GA--CAATGTCAAATCCAAGATCCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCGAC 1847799 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | || || |||||||| ||| | ||||| | || || || |||| ||||||||||||| Sbjct 1847800 TGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACGTTGAGCGACTACAATATTCAAA 1847859 Query 25186 A 25186 | Sbjct 1847860 A 1847860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327920782225