Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1 122 1e-22
>seq1
Length=4142182
Score = 122 bits (134), Expect = 1e-22
Identities = 328/490 (67%), Gaps = 10/490 (2%)
Strand=Plus/Minus
Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG-AAGACGTAC 92985
|| || ||||| || |||||||| |||| | | | | ||||| || || ||| || ||
Sbjct 2622502 TCGGCGACAAACTCAATGTACTGGCACATGAGCTTAGAGTTCATGCCCAGCAAGCCG-AC 2622444
Query 92986 AGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045
||| || || || || | ||| ||||| || || | || ||||| | || | | |
Sbjct 2622443 AGGGAGCGCCTCAGTTAGGAACTCTTTTTCAATAGCGACTGCTTCGACGATGACCT-TCT 2622385
Query 93046 TACTCTACTATTTGGTGGTTTTTGTAC--GACATAATTGTAC-ATTAAGCACGCAAAGTC 93102
| | || |||||| | |||| | || || ||| | | || ||| ||||| ||
Sbjct 2622384 CAATGAGCT-TTTGGTCGGGCTTGTGCTTGAGATG-TTGCAGGAGTAGGCATGCAAAATC 2622327
Query 93103 GGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAG 93162
||| || | ||| || || || || || | ||||| || || | |||||| | |||
Sbjct 2622326 GGTGTGCATACCCTCATCACGAGAGATGAGTTCATTTGAAAAGGTGAGACCTGGCATCAG 2622267
Query 93163 TCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCAC 93222
|| |||||||||| || ||||||||||| || || || || ||||| || ||
Sbjct 2622266 ACCCTTGCTCTTGAGCCAGAAGATTGAAGCAAATGATCCGGAGAAGAAGATACCCTCGAC 2622207
Query 93223 GGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAA 93282
|||||| || || || | |||| || ||| | | ||| ||||||| | |
Sbjct 2622206 GGCTGCGAAAGCAACCAGTCGTTGAGCGAAAGTGGACTCCTTATCAGAGATCCATCTAAG 2622147
Query 93283 AGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTA-AT 93341
|||||| ||||| || ||| || || || | || |||||||| | || ||||| |
Sbjct 2622146 AGCCCAGTCGGCCTTCTTCCGTATGCAGGGGATGGTGTCGATAGCATCGAACAGGTATGT 2622087
Query 93342 CTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGA 93401
|| ||| | | ||| | |||||| ||||| | || || ||||| ||||| ||||
Sbjct 2622086 CT-TCTCTTTGGGATCCTTCACGTATGTGTCGATGAGGAGTGAGTACATCTCAGAGTGGA 2622028
Query 93402 CATTCTCCAT 93411
|||||||||
Sbjct 2622027 TATTCTCCAT 2622018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860695588600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |