Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18]
15 sequences; 35,456,005 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 3e-27
seq1 86.0 5e-12
>seq2
Length=3515922
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || ||||| || || || ||| | || || ||||| || | | |
Sbjct 2794236 ATGCAAATCTTTGTCAAGACTTTGACGGGCAAGACGATTACGCTGGAAGTCGAGAGCTCA 2794177
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || ||||| ||| || |||||||||||||| || |||||||| ||
Sbjct 2794176 GACACCATTGACAATGTCAAATCAAAGATCCAAGACAAGGAGGGCATCCCACCCGACCAG 2794117
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || || || ||||| ||| | |||||| ||| || | ||||| ||||||
Sbjct 2794116 CAGAGACTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACGCTGTCCGACTACAAC 2794057
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || |||| | ||||| || || || | || || |||
Sbjct 2794056 ATTCAGAAGGAGAGCACCTTGCATTTGGTGCTGAGACTCCGTGGCGGT 2794009
Score = 134 bits (148), Expect = 1e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || ||| | || || || || | || ||||| || || | | |
Sbjct 2794692 ATGCAAATTTTTGTGAAGACTCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCGAGC 2794633
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | |||| || |||||||||||||| || || || || |||||
Sbjct 2794632 GATACCATCGACAACGTCAAGAGCAAGATTCAAGACAAGGAAGGCATCCCCCCGGATCAG 2794573
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || |||||||| || || | || || ||||||| ||||||| ||||||
Sbjct 2794572 CAACGTCTGATCTTTGCCGGAAAGCAACTTGAAGACGGCCGCACCCTCTCCGACTACAAC 2794513
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || |||||||| ||
Sbjct 2794512 ATCCAGAAAGAATCGAC 2794496
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || |||||| | ||||| || ||| |||| || || || ||| | |
Sbjct 2794464 ATGCAGATCTTCGTCAAAACTCTGACCGGCAAGACGATCACACTAGAGGTCGAATCTTCA 2794405
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| | |||| || || |||||||||||||| || ||||| || ||
Sbjct 2794404 GATACGATTGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 2794345
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| | || || |||||||| ||| | ||||| ||| || |||| || ||||||
Sbjct 2794344 CAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCTCAGACTACAAC 2794285
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||| || |||||||| | ||| | ||| | || | ||||| ||
Sbjct 2794284 ATTCAGAAGGAATCCACTCTCCATCTCGTTCTCAGACTTCGCGGTGG 2794238
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||||| ||||| || || |||| || || || || | | |
Sbjct 2794920 ATGCAGATCTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGAGC 2794861
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || || |||||||| || ||||| || |||||
Sbjct 2794860 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 2794801
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || ||||| |||||| | |||||| ||||||| | ||||||||||
Sbjct 2794800 CAGCGCCTCATCTTCGCCGGTAAACAGCTCGAGGATGGCCGCACCTTGAGCGATTACAAC 2794741
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || || || ||| | || || ||
Sbjct 2794740 ATCCAGAAGGAGTCGACCTTGCACTTGGT 2794712
>seq1
Length=4142182
Score = 86.0 bits (94), Expect = 5e-12
Identities = 116/162 (72%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 117051 TTGGCGCGACGCATGATCGCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTT 117110
|| || | ||| || | |||||||| ||||| || || ||||| || || |||
Sbjct 2622177 TTCGCTCAACGACTGGTTGCTTTCGCAGCCGTCGAGGGTATCTTCTTCTCCGGATCATTT 2622236
Query 117111 GCTGCCATATTTTTTATCAAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAA 117170
||| | || || | |||||| ||| ||||| ||||| ||||| || ||| || |||
Sbjct 2622237 GCTTCAATCTTCTGGCTCAAGAGCAAGGGTCTGATGCCAGGTCTCACCTTTTCAAATGAA 2622296
Query 117171 TTAATATCGCGTGACGAAGGTTTACACACCGATTTTGCGTGC 117212
| || || ||||| || ||| | |||||||||||||| |||
Sbjct 2622297 CTCATCTCTCGTGATGAGGGTATGCACACCGATTTTGCATGC 2622338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727923268475
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |